G1736065



Basic Information


Item Value
gene id G1736065
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 39143710 ~ 39144316 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1988173
aagatggctgacagaAACATTACGGgggaagcaaatGGATtcctgagaaaaccagcaaaccaggctgtcatctgggtaacagtggatgtaaagaatcaagctagctaaagcatttactgcataTGAATCTCTGTGAgacattctttttcagtcatatccaataccaggtgtatcaatctccattctttgaatgatgctgtgtctgcatgtatgactgacaattatacacttcaacagtgtttaccactcctgctcctgggacatcaatgattacacattgtaactatgcaatagactagaaacatgatttaagtaaaggctgatttgtaattcatatatacagaaaaaaaacCTATGCATATCTATCTCCCTTCATAGTATTTCAAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1988173 True 387 lncRNA 0.37 2 39143710 39144316

Neighbor


gene id symbol gene type direction distance location
zgc:92664 LOC106608937 coding upstream 120846 39003738 ~ 39022864 (+)
alox12 LOC106608934 coding upstream 157477 38969383 ~ 38986233 (+)
LOC110500354 LOC106608903 coding upstream 175833 38956139 ~ 38982550 (+)
arrb2b LOC106608931 coding upstream 204591 38867935 ~ 38939119 (+)
hmgb3a LOC106608930 coding upstream 279180 38857116 ~ 38864530 (+)
nat16 LOC106608942 coding downstream 34831 39179147 ~ 39211035 (+)
LOC110500362 LOC106608944 coding downstream 84332 39228648 ~ 39237917 (+)
nat16l LOC106608945 coding downstream 101515 39245831 ~ 39256597 (+)
LOC110500364 LOC106608946 coding downstream 178549 39322865 ~ 39331908 (+)
zanl LOC106608949 coding downstream 275814 39420130 ~ 39453254 (+)
G1736042 NA non-coding upstream 37851 39103955 ~ 39105859 (+)
G1735932 pelp1 non-coding upstream 188309 38943178 ~ 38955401 (+)
G1735820 NA non-coding upstream 473787 38669409 ~ 38669923 (+)
G1735795 NA non-coding upstream 515558 38627784 ~ 38628152 (+)
LOC118942927 NA non-coding downstream 4080 39138542 ~ 39154522 (+)
G1736093 NA non-coding downstream 47126 39191442 ~ 39191854 (+)
G1736133 NA non-coding downstream 151746 39296062 ~ 39302368 (+)
G1736154 ap1s1 non-coding downstream 196322 39340638 ~ 39362957 (+)
G1736209 NA non-coding downstream 306544 39450860 ~ 39451178 (+)
LOC110500301 LOC106609063 other upstream 1061436 38076983 ~ 38083972 (+)
G1734961 NA other upstream 1097204 38045108 ~ 38046506 (+)
G1734960 NA other upstream 1098644 38043091 ~ 38045066 (+)
cited1 LOC106609035 other upstream 1380452 37758759 ~ 37765562 (+)
G1736098 NA other downstream 89348 39233664 ~ 39289670 (+)
G1736484 LOC106608963 other downstream 731440 39875756 ~ 39876950 (+)
G1737353 NA other downstream 918390 40062706 ~ 40063325 (+)
LOC110500409 LOC106599480 other downstream 1257188 40401452 ~ 40404840 (+)

Expression



Co-expression Network