G1736093



Basic Information


Item Value
gene id G1736093
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 39191442 ~ 39191854 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1988204
TGCATATATTTATATGTGTCTCGCCCTGACCTtggtattctttgttttctttattattttggttaggtcagggtgtgacatgggtgatatgtgtgtttttgtcttattctaggatgtttgtactgtctaggtttttttgtagatttatggggttgttttcatctaggtgtttatcgttgtctctgattgggaaccatatttaggcagccatcttctttgggtatttcgtgggttattgtctatgttatgttgcacaTTAGCACATTGTTTATATAGCGGTCTCGTTCATAttattcgttttgttgtttttgttcttcGTGTTCTTCATGTTCTTcattaaataaagaagaatgtattctaacc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1988204 True 363 lncRNA 0.35 2 39191442 39191854

Neighbor


gene id symbol gene type direction distance location
LOC118942927 NA coding upstream 37096 39138542 ~ 39154522 (+)
zgc:92664 LOC106608937 coding upstream 168578 39003738 ~ 39022864 (+)
alox12 LOC106608934 coding upstream 205209 38969383 ~ 38986233 (+)
LOC110500354 LOC106608903 coding upstream 223565 38956139 ~ 38982550 (+)
arrb2b LOC106608931 coding upstream 252323 38867935 ~ 38939119 (+)
LOC110500362 LOC106608944 coding downstream 36794 39228648 ~ 39237917 (+)
nat16l LOC106608945 coding downstream 53977 39245831 ~ 39256597 (+)
LOC110500364 LOC106608946 coding downstream 131011 39322865 ~ 39331908 (+)
zanl LOC106608949 coding downstream 228276 39420130 ~ 39453254 (+)
trnaw-cca-56 NA coding downstream 378802 39570656 ~ 39570727 (+)
G1735986 NA non-coding upstream 13264 39034509 ~ 39178178 (+)
G1736065 NA non-coding upstream 47126 39143710 ~ 39144316 (+)
G1736042 NA non-coding upstream 85583 39103955 ~ 39105859 (+)
G1736133 NA non-coding downstream 104208 39296062 ~ 39302368 (+)
G1736154 ap1s1 non-coding downstream 148784 39340638 ~ 39362957 (+)
G1736209 NA non-coding downstream 259006 39450860 ~ 39451178 (+)
G1736377 NA non-coding downstream 512754 39704608 ~ 39705136 (+)
G1736434 NA non-coding downstream 584577 39776431 ~ 39842962 (+)
LOC110500301 LOC106609063 other upstream 1109168 38076983 ~ 38083972 (+)
G1734961 NA other upstream 1144936 38045108 ~ 38046506 (+)
G1734960 NA other upstream 1146376 38043091 ~ 38045066 (+)
cited1 LOC106609035 other upstream 1428184 37758759 ~ 37765562 (+)
G1736098 NA other downstream 41810 39233664 ~ 39289670 (+)
G1736484 LOC106608963 other downstream 683902 39875756 ~ 39876950 (+)
G1737353 NA other downstream 870852 40062706 ~ 40063325 (+)
LOC110500409 LOC106599480 other downstream 1209650 40401452 ~ 40404840 (+)
G1737866 LOC103384823 other downstream 1360157 40552011 ~ 40553853 (+)

Expression



Co-expression Network