G1736434


Basic Information

Item Value
gene id G1736434
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 39776431 ~ 39842962 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1988572
CACCATGATCAGGAAACATCCCCACCCAACTTCCTACCACACCAGATCGACCTGATCCAAAAACTTCCAACCTCCTCTTACACAACTGTGTAAATCTCAAATCGCCTGTGCTAAACTTCCATCCAAAAGTAGCTGCATTTGACTCTTTAAGGTGAACCCCCTCCAGTATATCTGGATCCAAACACTATAATATTACTCAAAAGGCAGACAGTGTTGTTTCTCTATGGCAGCTCCCTCACTAAAACACACCCTACATtggcaaaagtatgtggacacctgctcagtccagggtttttcttttctttttaccattgtctacattgtagaataatagtcaaggcatcaaaactacaaaataacacatggaatcatgttgtaaccaaaaaagggataaacaaatcaaaatgtatttttatatttgagattcttcaaagtagccaccgtttgccttgatgacggctttgcacactcttggcattctctcaaccagcttcataaggtagtctcctggaatgcatttcaattaacaggtgtgccttgtaagcggttcatttgtggaatttctttccttaatgcgtatgagccaatcagttgtgttgtgacaaggtagaggtggtatacaaaagataaccccatttggtaaaagaccaagtccatattatggcagaaACAGCTgaagtaagcaaagagaaaggacagtttatcattactttaagacaggaaGCTCAGTcgatccggaaaatgtcaagaactttgaaagattcttcaagtgcagtcgcaaaaactataatgaaactggctttcataaggaccgtcacaggaatggaagacccagagctgTTTTTTTgggtgctatttaatgaagct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1988572 True 867 lncRNA 0.40 2 39776431 39842962

Neighbor

gene id symbol gene type direction distance location
acox3 acox3 coding upstream 70229 39673972 ~ 39706202 (+)
mpdu1b LOC106608952 coding upstream 176116 39595167 ~ 39600315 (+)
trnaw-cca-56 NA coding upstream 205704 39570656 ~ 39570727 (+)
zanl LOC106608949 coding upstream 323177 39420130 ~ 39453254 (+)
LOC110500364 LOC106608946 coding upstream 444523 39322865 ~ 39331908 (+)
LOC110500831 NA coding downstream 102301 39945263 ~ 39952801 (+)
LOC110500392 LOC106608967 coding downstream 110317 39953279 ~ 39959230 (+)
LOC110500393 LOC106608968 coding downstream 129357 39972319 ~ 39997941 (+)
LOC110500394 LOC106608969 coding downstream 159936 40002898 ~ 40050645 (+)
tmm85 emc4 coding downstream 210919 40053881 ~ 40060698 (+)
G1736377 NA non-coding upstream 71295 39704608 ~ 39705136 (+)
G1736209 NA non-coding upstream 325253 39450860 ~ 39451178 (+)
G1736154 ap1s1 non-coding upstream 413474 39340638 ~ 39362957 (+)
G1736133 NA non-coding upstream 474063 39296062 ~ 39302368 (+)
G1736093 NA non-coding upstream 584577 39191442 ~ 39191854 (+)
G1736473 NA non-coding downstream 15657 39858619 ~ 39858919 (+)
G1737283 NA non-coding downstream 117112 39960074 ~ 39960286 (+)
G1737306 NA non-coding downstream 135774 39978736 ~ 39986609 (+)
G1737310 NA non-coding downstream 156453 39999415 ~ 39999762 (+)
G1737344 NA non-coding downstream 208487 40051449 ~ 40051766 (+)
G1736098 NA other upstream 486761 39233664 ~ 39289670 (+)
nat16 LOC106608942 other upstream 566946 39179147 ~ 39211035 (+)
arrb2b LOC106608931 other upstream 851503 38867935 ~ 38939119 (+)
LOC110500301 LOC106609063 other upstream 1694157 38076983 ~ 38083972 (+)
G1734961 NA other upstream 1729925 38045108 ~ 38046506 (+)
G1736484 LOC106608963 other downstream 32794 39875756 ~ 39876950 (+)
G1737353 NA other downstream 219744 40062706 ~ 40063325 (+)
LOC110500409 LOC106599480 other downstream 558542 40401452 ~ 40404840 (+)
G1737866 LOC103384823 other downstream 709049 40552011 ~ 40553853 (+)
G1738057 LOC100194703 other downstream 1150193 40955050 ~ 40997320 (+)

Expression


Co-expression Network