Gene
RNA
| Item | Value |
|---|---|
| gene id | G1737310 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 39999415 ~ 39999762 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1989605 | True | 348 | lncRNA | 0.49 | 1 | 39999415 | 39999762 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500393 | LOC106608968 | coding | upstream | 1474 | 39972319 ~ 39997941 (+) |
| LOC110500392 | LOC106608967 | coding | upstream | 40185 | 39953279 ~ 39959230 (+) |
| LOC110500831 | NA | coding | upstream | 46614 | 39945263 ~ 39952801 (+) |
| LOC110500384 | LOC106608960 | coding | upstream | 142910 | 39828322 ~ 39856505 (+) |
| acox3 | acox3 | coding | upstream | 293213 | 39673972 ~ 39706202 (+) |
| LOC110500394 | LOC106608969 | coding | downstream | 3136 | 40002898 ~ 40050645 (+) |
| tmm85 | emc4 | coding | downstream | 54119 | 40053881 ~ 40060698 (+) |
| LOC110500395 | plcg | coding | downstream | 86424 | 40086186 ~ 40102011 (+) |
| LOC110500396 | NA | coding | downstream | 113214 | 40112976 ~ 40116217 (+) |
| LOC110500397 | LOC106608972 | coding | downstream | 118529 | 40118291 ~ 40133485 (+) |
| G1737306 | NA | non-coding | upstream | 12806 | 39978736 ~ 39986609 (+) |
| G1737283 | NA | non-coding | upstream | 39129 | 39960074 ~ 39960286 (+) |
| G1736473 | NA | non-coding | upstream | 140496 | 39858619 ~ 39858919 (+) |
| G1736434 | NA | non-coding | upstream | 156453 | 39776431 ~ 39842962 (+) |
| G1736377 | NA | non-coding | upstream | 294279 | 39704608 ~ 39705136 (+) |
| G1737344 | NA | non-coding | downstream | 51687 | 40051449 ~ 40051766 (+) |
| G1737345 | NA | non-coding | downstream | 53004 | 40052766 ~ 40053023 (+) |
| G1737351 | NA | non-coding | downstream | 61902 | 40061664 ~ 40061904 (+) |
| G1737370 | NA | non-coding | downstream | 77871 | 40077633 ~ 40078011 (+) |
| G1737372 | NA | non-coding | downstream | 79584 | 40079346 ~ 40079585 (+) |
| G1736484 | LOC106608963 | other | upstream | 122465 | 39875756 ~ 39876950 (+) |
| G1736098 | NA | other | upstream | 709745 | 39233664 ~ 39289670 (+) |
| nat16 | LOC106608942 | other | upstream | 789930 | 39179147 ~ 39211035 (+) |
| arrb2b | LOC106608931 | other | upstream | 1074487 | 38867935 ~ 38939119 (+) |
| LOC110500301 | LOC106609063 | other | upstream | 1917141 | 38076983 ~ 38083972 (+) |
| G1737353 | NA | other | downstream | 62944 | 40062706 ~ 40063325 (+) |
| LOC110500409 | LOC106599480 | other | downstream | 401742 | 40401452 ~ 40404840 (+) |
| G1737866 | LOC103384823 | other | downstream | 552249 | 40552011 ~ 40553853 (+) |
| G1738057 | LOC100194703 | other | downstream | 993393 | 40955050 ~ 40997320 (+) |
| G1738119 | NA | other | downstream | 1024948 | 41024710 ~ 41029136 (+) |
