Gene
RNA
| Item | Value |
|---|---|
| gene id | G1737372 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 40079346 ~ 40079585 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: RNA-directed DNA polymerase homolog |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1989668 | True | 240 | lncRNA | 0.52 | 1 | 40079346 | 40079585 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tmm85 | emc4 | coding | upstream | 18648 | 40053881 ~ 40060698 (+) |
| LOC110500394 | LOC106608969 | coding | upstream | 28701 | 40002898 ~ 40050645 (+) |
| LOC110500393 | LOC106608968 | coding | upstream | 81405 | 39972319 ~ 39997941 (+) |
| LOC110500392 | LOC106608967 | coding | upstream | 120116 | 39953279 ~ 39959230 (+) |
| LOC110500831 | NA | coding | upstream | 126545 | 39945263 ~ 39952801 (+) |
| LOC110500395 | plcg | coding | downstream | 6601 | 40086186 ~ 40102011 (+) |
| LOC110500396 | NA | coding | downstream | 33391 | 40112976 ~ 40116217 (+) |
| LOC110500397 | LOC106608972 | coding | downstream | 38706 | 40118291 ~ 40133485 (+) |
| LOC110500398 | LOC106608973 | coding | downstream | 58041 | 40137626 ~ 40158575 (+) |
| LOC110500400 | LOC106608974 | coding | downstream | 86507 | 40166092 ~ 40194474 (+) |
| G1737370 | NA | non-coding | upstream | 1335 | 40077633 ~ 40078011 (+) |
| G1737351 | NA | non-coding | upstream | 17442 | 40061664 ~ 40061904 (+) |
| G1737345 | NA | non-coding | upstream | 26323 | 40052766 ~ 40053023 (+) |
| G1737344 | NA | non-coding | upstream | 27580 | 40051449 ~ 40051766 (+) |
| G1737310 | NA | non-coding | upstream | 79584 | 39999415 ~ 39999762 (+) |
| G1737318 | NA | non-coding | downstream | 22996 | 40102581 ~ 40102871 (+) |
| G1737385 | NA | non-coding | downstream | 27486 | 40107071 ~ 40107333 (+) |
| G1737391 | NA | non-coding | downstream | 32507 | 40112092 ~ 40112291 (+) |
| G1737353 | NA | other | upstream | 16021 | 40062706 ~ 40063325 (+) |
| G1736484 | LOC106608963 | other | upstream | 202396 | 39875756 ~ 39876950 (+) |
| G1736098 | NA | other | upstream | 789676 | 39233664 ~ 39289670 (+) |
| nat16 | LOC106608942 | other | upstream | 869861 | 39179147 ~ 39211035 (+) |
| arrb2b | LOC106608931 | other | upstream | 1154418 | 38867935 ~ 38939119 (+) |
| LOC110500409 | LOC106599480 | other | downstream | 321919 | 40401452 ~ 40404840 (+) |
| G1737866 | LOC103384823 | other | downstream | 472426 | 40552011 ~ 40553853 (+) |
| G1738057 | LOC100194703 | other | downstream | 913570 | 40955050 ~ 40997320 (+) |
| G1738119 | NA | other | downstream | 945125 | 41024710 ~ 41029136 (+) |
| G1739103 | NA | other | downstream | 1809226 | 41888811 ~ 41897856 (+) |
