G1737825


Basic Information

Item Value
gene id G1737825
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 40478477 ~ 40478687 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1990194
cttcagtgggcaaatgctcacctttgataaCCActagcacgctggagaagtgtactcttcacggatgaatcccggtttcaactgtgcCGGACAGAttgcagacagcgtgtatgggtTCGTGtgagcgagcggtttgctgatgtcaacattgtgaacagagtgacccatggtggcggtggggttatggtatggacaggcataagctaaggac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1990194 True 211 lncRNA 0.52 1 40478477 40478687

Neighbor

gene id symbol gene type direction distance location
LOC110500409 LOC106599480 coding upstream 73637 40401452 ~ 40404840 (+)
LOC110500405 LOC100194596 coding upstream 125588 40322170 ~ 40352889 (+)
LOC118942929 NA coding upstream 221432 40255990 ~ 40257045 (+)
LOC110500400 LOC106608974 coding upstream 284003 40166092 ~ 40194474 (+)
LOC110500398 LOC106608973 coding upstream 319902 40137626 ~ 40158575 (+)
LOC110500418 NA coding downstream 315762 40794449 ~ 40837182 (+)
LOC110500419 LOC106608987 coding downstream 368305 40846992 ~ 40855143 (+)
LOC110500424 LOC106608992 coding downstream 571502 41050189 ~ 41058764 (+)
LOC110500425 LOC106608993 coding downstream 629759 41108446 ~ 41125934 (+)
LOC110500427 LOC106608994 coding downstream 652139 41130826 ~ 41183998 (+)
G1737821 NA non-coding upstream 3646 40474603 ~ 40474831 (+)
G1737816 NA non-coding upstream 10328 40462353 ~ 40468149 (+)
G1737815 NA non-coding upstream 16827 40461354 ~ 40461650 (+)
G1737789 LOC106608978 non-coding upstream 41267 40435318 ~ 40437210 (+)
G1737831 NA non-coding downstream 11802 40490489 ~ 40490774 (+)
G1737832 NA non-coding downstream 13854 40492541 ~ 40492795 (+)
G1737794 NA non-coding downstream 15041 40493728 ~ 40498209 (+)
G1737845 LOC106608980 non-coding downstream 37294 40515981 ~ 40520844 (+)
G1737865 NA non-coding downstream 69507 40548194 ~ 40550620 (+)
G1737353 NA other upstream 415152 40062706 ~ 40063325 (+)
G1736484 LOC106608963 other upstream 601527 39875756 ~ 39876950 (+)
G1736098 NA other upstream 1188807 39233664 ~ 39289670 (+)
nat16 LOC106608942 other upstream 1268992 39179147 ~ 39211035 (+)
G1737866 LOC103384823 other downstream 73324 40552011 ~ 40553853 (+)
G1738057 LOC100194703 other downstream 514468 40955050 ~ 40997320 (+)
G1738119 NA other downstream 546023 41024710 ~ 41029136 (+)
G1739103 NA other downstream 1410124 41888811 ~ 41897856 (+)
cxcl8c cxcl8c other downstream 1806369 42285056 ~ 42288500 (+)

Expression


Co-expression Network