G1738163


Basic Information

Item Value
gene id G1738163
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 41138412 ~ 41138653 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1990574
gaccctttactcagtactttgttgaagcacctttcgcagcgattacagccttgagtcttcttgggtatgacgctacaaagcttggcacacctgtatttggggagtttctcccattcttctctgcagatcctctcaagcactgtcaggctggatggggagcgttgctgaacaacaatttccaggtctctccagagatgttaagcAGGATTCtcgtctgggctctggctgggccacacgaggac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1990574 True 242 lncRNA 0.51 1 41138412 41138653

Neighbor

gene id symbol gene type direction distance location
LOC110500425 LOC106608993 coding upstream 12478 41108446 ~ 41125934 (+)
LOC110500424 LOC106608992 coding upstream 79648 41050189 ~ 41058764 (+)
LOC110500419 LOC106608987 coding upstream 283269 40846992 ~ 40855143 (+)
LOC110500418 NA coding upstream 301230 40794449 ~ 40837182 (+)
LOC110500409 LOC106599480 coding upstream 733572 40401452 ~ 40404840 (+)
LOC110500431 LOC106608996 coding downstream 45616 41184269 ~ 41201121 (+)
prkd4 LOC106608995 coding downstream 64637 41203290 ~ 41215989 (+)
LOC110500837 LOC106608998 coding downstream 86119 41224772 ~ 41247133 (+)
LOC110500434 LOC106609000 coding downstream 118670 41257323 ~ 41266367 (+)
LOC110500843 LOC106609004 coding downstream 446155 41584808 ~ 41601466 (+)
G1738157 NA non-coding upstream 5759 41132227 ~ 41132653 (+)
G1738057 LOC100194703 non-coding upstream 141092 40955050 ~ 40997320 (+)
G1738055 NA non-coding upstream 212122 40923375 ~ 40926290 (+)
G1738050 NA non-coding upstream 226471 40911155 ~ 40911941 (+)
G1738049 LOC100380853 non-coding upstream 227894 40909841 ~ 40910518 (+)
G1738166 NA non-coding downstream 3563 41142216 ~ 41142433 (+)
G1738167 NA non-coding downstream 6103 41144756 ~ 41144968 (+)
G1738170 NA non-coding downstream 8769 41147422 ~ 41147643 (+)
G1738172 NA non-coding downstream 9669 41148322 ~ 41148531 (+)
G1738173 NA non-coding downstream 11992 41150645 ~ 41150864 (+)
G1738119 NA other upstream 109276 41024710 ~ 41029136 (+)
G1737866 LOC103384823 other upstream 584559 40552011 ~ 40553853 (+)
G1737353 NA other upstream 1075087 40062706 ~ 40063325 (+)
G1739103 NA other downstream 750158 41888811 ~ 41897856 (+)
cxcl8c cxcl8c other downstream 1146403 42285056 ~ 42288500 (+)
si:dkey-185m8.2 LOC106608874 other downstream 1215924 42354556 ~ 42370239 (+)
G1739440 vax2 other downstream 1362696 42501349 ~ 42502357 (+)
G1740312 r1441 other downstream 2117000 43255653 ~ 43327738 (+)

Expression


Co-expression Network