Gene
RNA
| Item | Value |
|---|---|
| gene id | G1738265 |
| gene name | zg57 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 41350490 ~ 41351424 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Gastrula zinc finger protein XLCGF57.1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1990697 | True | 851 | lncRNA | 0.47 | 2 | 41350490 | 41351424 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500434 | LOC106609000 | coding | upstream | 84123 | 41257323 ~ 41266367 (+) |
| LOC110500837 | LOC106608998 | coding | upstream | 103357 | 41224772 ~ 41247133 (+) |
| prkd4 | LOC106608995 | coding | upstream | 134501 | 41203290 ~ 41215989 (+) |
| LOC110500431 | LOC106608996 | coding | upstream | 149369 | 41184269 ~ 41201121 (+) |
| LOC110500427 | LOC106608994 | coding | upstream | 166492 | 41130826 ~ 41183998 (+) |
| LOC110500843 | LOC106609004 | coding | downstream | 233384 | 41584808 ~ 41601466 (+) |
| LOC110500443 | LOC106608913 | coding | downstream | 257826 | 41609250 ~ 41615747 (+) |
| LOC110500439 | LOC106609016 | coding | downstream | 291583 | 41643007 ~ 41672302 (+) |
| LOC110500440 | LOC106609014 | coding | downstream | 324822 | 41676246 ~ 41688377 (+) |
| LOC110500441 | LOC106609015 | coding | downstream | 337021 | 41688445 ~ 41693821 (+) |
| G1738185 | NA | non-coding | upstream | 177171 | 41173034 ~ 41173319 (+) |
| G1738182 | NA | non-coding | upstream | 182535 | 41167676 ~ 41167955 (+) |
| G1738174 | NA | non-coding | upstream | 198792 | 41151458 ~ 41151698 (+) |
| G1738173 | NA | non-coding | upstream | 199626 | 41150645 ~ 41150864 (+) |
| G1738291 | NA | non-coding | downstream | 38923 | 41390347 ~ 41525819 (+) |
| G1738303 | NA | non-coding | downstream | 121839 | 41473263 ~ 41480556 (+) |
| G1738824 | NA | non-coding | downstream | 176245 | 41527669 ~ 41535345 (+) |
| G1738829 | NA | non-coding | downstream | 187068 | 41538492 ~ 41538694 (+) |
| G1738831 | NA | non-coding | downstream | 189469 | 41540893 ~ 41541142 (+) |
| G1738119 | NA | other | upstream | 321354 | 41024710 ~ 41029136 (+) |
| G1738057 | LOC100194703 | other | upstream | 353170 | 40955050 ~ 40997320 (+) |
| G1737866 | LOC103384823 | other | upstream | 796637 | 40552011 ~ 40553853 (+) |
| LOC110500409 | LOC106599480 | other | upstream | 946805 | 40401452 ~ 40404840 (+) |
| G1737353 | NA | other | upstream | 1287165 | 40062706 ~ 40063325 (+) |
| G1739103 | NA | other | downstream | 537387 | 41888811 ~ 41897856 (+) |
| cxcl8c | cxcl8c | other | downstream | 933632 | 42285056 ~ 42288500 (+) |
| si:dkey-185m8.2 | LOC106608874 | other | downstream | 1003153 | 42354556 ~ 42370239 (+) |
| G1739440 | vax2 | other | downstream | 1149925 | 42501349 ~ 42502357 (+) |
| G1740312 | r1441 | other | downstream | 1904229 | 43255653 ~ 43327738 (+) |
