G1738892


Basic Information

Item Value
gene id G1738892
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 41720403 ~ 41720637 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1991416
tcttcagagagagagagagaaaatggatgCTCCATGCTGTTGCGCATACAAaatgctgctggcacccagccatacaatgacgcgatgtgatctttctcgctaatttttctaaataaaagcctgaaactatgcctaaagactgttcacaccatggggaaaccgtaggaaaaggaatctggttgatatccctttaaaaggagcgaaggcaggctatggaacatggagctttcaaaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1991416 True 235 lncRNA 0.43 1 41720403 41720637

Neighbor

gene id symbol gene type direction distance location
LOC110500441 LOC106609015 coding upstream 26582 41688445 ~ 41693821 (+)
LOC110500440 LOC106609014 coding upstream 32026 41676246 ~ 41688377 (+)
LOC110500439 LOC106609016 coding upstream 48101 41643007 ~ 41672302 (+)
LOC110500443 LOC106608913 coding upstream 104656 41609250 ~ 41615747 (+)
LOC110500843 LOC106609004 coding upstream 118937 41584808 ~ 41601466 (+)
LOC110500937 LOC106609011 coding downstream 28888 41749525 ~ 41755052 (+)
trnan-guu-128 NA coding downstream 58230 41778867 ~ 41778940 (+)
trnan-guu-129 NA coding downstream 60571 41781208 ~ 41781281 (+)
trnan-guu-130 NA coding downstream 61744 41782381 ~ 41782454 (+)
trnan-guu-131 NA coding downstream 62916 41783553 ~ 41783626 (+)
G1738831 NA non-coding upstream 179261 41540893 ~ 41541142 (+)
G1738829 NA non-coding upstream 181709 41538492 ~ 41538694 (+)
G1738824 NA non-coding upstream 185058 41527669 ~ 41535345 (+)
G1738291 NA non-coding upstream 194584 41390347 ~ 41525819 (+)
G1738303 NA non-coding upstream 239847 41473263 ~ 41480556 (+)
G1738893 NA non-coding downstream 1043 41721680 ~ 41722008 (+)
G1738924 NA non-coding downstream 48146 41768783 ~ 41769071 (+)
G1738925 LOC100380853 non-coding downstream 48864 41769501 ~ 41769847 (+)
G1739070 NA non-coding downstream 58190 41778827 ~ 41787548 (+)
G1739078 NA non-coding downstream 78286 41798923 ~ 41799152 (+)
G1738119 NA other upstream 691267 41024710 ~ 41029136 (+)
G1738057 LOC100194703 other upstream 723083 40955050 ~ 40997320 (+)
G1737866 LOC103384823 other upstream 1166550 40552011 ~ 40553853 (+)
LOC110500409 LOC106599480 other upstream 1316718 40401452 ~ 40404840 (+)
G1737353 NA other upstream 1657078 40062706 ~ 40063325 (+)
G1739103 NA other downstream 168174 41888811 ~ 41897856 (+)
cxcl8c cxcl8c other downstream 564419 42285056 ~ 42288500 (+)
si:dkey-185m8.2 LOC106608874 other downstream 633940 42354556 ~ 42370239 (+)
G1739440 vax2 other downstream 780712 42501349 ~ 42502357 (+)
G1740312 r1441 other downstream 1535016 43255653 ~ 43327738 (+)

Expression


Co-expression Network