Gene
RNA
| Item | Value |
|---|---|
| gene id | G1738924 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 41768783 ~ 41769071 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1991453 | True | 289 | lncRNA | 0.39 | 1 | 41768783 | 41769071 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500937 | LOC106609011 | coding | upstream | 13731 | 41749525 ~ 41755052 (+) |
| LOC110500441 | LOC106609015 | coding | upstream | 74962 | 41688445 ~ 41693821 (+) |
| LOC110500440 | LOC106609014 | coding | upstream | 80406 | 41676246 ~ 41688377 (+) |
| LOC110500439 | LOC106609016 | coding | upstream | 96481 | 41643007 ~ 41672302 (+) |
| LOC110500443 | LOC106608913 | coding | upstream | 153036 | 41609250 ~ 41615747 (+) |
| trnan-guu-128 | NA | coding | downstream | 9796 | 41778867 ~ 41778940 (+) |
| trnan-guu-129 | NA | coding | downstream | 12137 | 41781208 ~ 41781281 (+) |
| trnan-guu-130 | NA | coding | downstream | 13310 | 41782381 ~ 41782454 (+) |
| trnan-guu-131 | NA | coding | downstream | 14482 | 41783553 ~ 41783626 (+) |
| trnan-guu-132 | NA | coding | downstream | 15656 | 41784727 ~ 41784800 (+) |
| G1738893 | NA | non-coding | upstream | 46775 | 41721680 ~ 41722008 (+) |
| G1738892 | NA | non-coding | upstream | 48146 | 41720403 ~ 41720637 (+) |
| G1738831 | NA | non-coding | upstream | 227641 | 41540893 ~ 41541142 (+) |
| G1738829 | NA | non-coding | upstream | 230089 | 41538492 ~ 41538694 (+) |
| G1738824 | NA | non-coding | upstream | 233438 | 41527669 ~ 41535345 (+) |
| G1738925 | LOC100380853 | non-coding | downstream | 430 | 41769501 ~ 41769847 (+) |
| G1739070 | NA | non-coding | downstream | 9756 | 41778827 ~ 41787548 (+) |
| G1739078 | NA | non-coding | downstream | 29852 | 41798923 ~ 41799152 (+) |
| G1739115 | NA | non-coding | downstream | 151528 | 41920599 ~ 41926648 (+) |
| G1739131 | NA | non-coding | downstream | 166362 | 41935433 ~ 41937376 (+) |
| G1738119 | NA | other | upstream | 739647 | 41024710 ~ 41029136 (+) |
| G1738057 | LOC100194703 | other | upstream | 771463 | 40955050 ~ 40997320 (+) |
| G1737866 | LOC103384823 | other | upstream | 1214930 | 40552011 ~ 40553853 (+) |
| LOC110500409 | LOC106599480 | other | upstream | 1365098 | 40401452 ~ 40404840 (+) |
| G1737353 | NA | other | upstream | 1705458 | 40062706 ~ 40063325 (+) |
| G1739103 | NA | other | downstream | 119740 | 41888811 ~ 41897856 (+) |
| cxcl8c | cxcl8c | other | downstream | 515985 | 42285056 ~ 42288500 (+) |
| si:dkey-185m8.2 | LOC106608874 | other | downstream | 585506 | 42354556 ~ 42370239 (+) |
| G1739440 | vax2 | other | downstream | 732278 | 42501349 ~ 42502357 (+) |
| G1740312 | r1441 | other | downstream | 1486582 | 43255653 ~ 43327738 (+) |
