G1739078


Basic Information

Item Value
gene id G1739078
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 41798923 ~ 41799152 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1991622
gtcctgtacctgttatgagattcctgttaaattgccgtgctgagggtcaatgccaacacaagcctctctcgtgcaatcagttagtgtgtttgactgtcagtctaaaggttggtgctttgacaccacccagggatgacatttttcagattgtggagatgtgaactgacgcctgacttggcgtgagcttccatgagactttggcctgctgagggtcagtataaccacaagtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1991622 True 230 lncRNA 0.48 1 41798923 41799152

Neighbor

gene id symbol gene type direction distance location
trnan-guu-142 NA coding upstream 41 41798809 ~ 41798882 (+)
trnan-guu-141 NA coding upstream 1216 41797634 ~ 41797707 (+)
trnan-guu-140 NA coding upstream 2391 41796459 ~ 41796532 (+)
trnan-guu-139 NA coding upstream 3563 41795287 ~ 41795360 (+)
trnan-guu-138 NA coding upstream 4738 41794112 ~ 41794185 (+)
trnan-guu-143 NA coding downstream 828 41799980 ~ 41800053 (+)
trnan-guu-144 NA coding downstream 1996 41801148 ~ 41801221 (+)
trnan-guu-145 NA coding downstream 3167 41802319 ~ 41802392 (+)
trnan-guu-146 NA coding downstream 4335 41803487 ~ 41803560 (+)
trnan-guu-147 NA coding downstream 9019 41808171 ~ 41808244 (+)
G1739070 NA non-coding upstream 11375 41778827 ~ 41787548 (+)
G1738925 LOC100380853 non-coding upstream 29076 41769501 ~ 41769847 (+)
G1738924 NA non-coding upstream 29852 41768783 ~ 41769071 (+)
G1738893 NA non-coding upstream 76915 41721680 ~ 41722008 (+)
G1738892 NA non-coding upstream 78286 41720403 ~ 41720637 (+)
G1739115 NA non-coding downstream 121447 41920599 ~ 41926648 (+)
G1739131 NA non-coding downstream 136281 41935433 ~ 41937376 (+)
G1739093 NA non-coding downstream 314164 42113316 ~ 42120480 (+)
G1739245 NA non-coding downstream 323238 42122390 ~ 42123986 (+)
G1739084 NA non-coding downstream 343201 42142353 ~ 42143265 (+)
G1738119 NA other upstream 769787 41024710 ~ 41029136 (+)
G1738057 LOC100194703 other upstream 801603 40955050 ~ 40997320 (+)
G1737866 LOC103384823 other upstream 1245070 40552011 ~ 40553853 (+)
LOC110500409 LOC106599480 other upstream 1395238 40401452 ~ 40404840 (+)
G1737353 NA other upstream 1735598 40062706 ~ 40063325 (+)
G1739103 NA other downstream 89659 41888811 ~ 41897856 (+)
cxcl8c cxcl8c other downstream 485904 42285056 ~ 42288500 (+)
si:dkey-185m8.2 LOC106608874 other downstream 555425 42354556 ~ 42370239 (+)
G1739440 vax2 other downstream 702197 42501349 ~ 42502357 (+)
G1740312 r1441 other downstream 1456501 43255653 ~ 43327738 (+)

Expression


Co-expression Network