Gene
RNA
| Item | Value |
|---|---|
| gene id | G1739093 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 42113316 ~ 42120480 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1991640 | True | 981 | lncRNA | 0.40 | 2 | 42113316 | 42120480 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnas-gcu-264 | NA | coding | upstream | 22595 | 42090640 ~ 42090721 (+) |
| trnas-gcu-263 | NA | coding | upstream | 24566 | 42088669 ~ 42088750 (+) |
| LOC110500448 | LOC106608889 | coding | upstream | 60678 | 42006315 ~ 42052638 (+) |
| LOC110500845 | LOC106608891 | coding | upstream | 138130 | 41942621 ~ 41975186 (+) |
| trnan-guu-197 | NA | coding | upstream | 233482 | 41879761 ~ 41879834 (+) |
| LOC110500456 | LOC106608882 | coding | downstream | 92964 | 42213444 ~ 42220624 (+) |
| cxcl8c | cxcl8c | coding | downstream | 164649 | 42285056 ~ 42288500 (+) |
| si:dkey-185m8.2 | LOC106608874 | coding | downstream | 234076 | 42354556 ~ 42370239 (+) |
| si:ch211-1o7.2 | ankrd53 | coding | downstream | 287170 | 42407650 ~ 42410829 (+) |
| LOC110500464 | NA | coding | downstream | 352787 | 42473267 ~ 42482530 (+) |
| G1739131 | NA | non-coding | upstream | 175940 | 41935433 ~ 41937376 (+) |
| G1739115 | NA | non-coding | upstream | 186668 | 41920599 ~ 41926648 (+) |
| G1739078 | NA | non-coding | upstream | 314164 | 41798923 ~ 41799152 (+) |
| G1739070 | NA | non-coding | upstream | 325768 | 41778827 ~ 41787548 (+) |
| G1738925 | LOC100380853 | non-coding | upstream | 343469 | 41769501 ~ 41769847 (+) |
| G1739245 | NA | non-coding | downstream | 1910 | 42122390 ~ 42123986 (+) |
| G1739084 | NA | non-coding | downstream | 21873 | 42142353 ~ 42143265 (+) |
| G1739286 | LOC106608879 | non-coding | downstream | 107634 | 42228114 ~ 42228789 (+) |
| G1739288 | NA | non-coding | downstream | 108635 | 42229115 ~ 42229351 (+) |
| G1739289 | NA | non-coding | downstream | 108939 | 42229419 ~ 42229623 (+) |
| G1739103 | NA | other | upstream | 215460 | 41888811 ~ 41897856 (+) |
| G1738119 | NA | other | upstream | 1084180 | 41024710 ~ 41029136 (+) |
| G1738057 | LOC100194703 | other | upstream | 1115996 | 40955050 ~ 40997320 (+) |
| G1737866 | LOC103384823 | other | upstream | 1559463 | 40552011 ~ 40553853 (+) |
| LOC110500409 | LOC106599480 | other | upstream | 1709631 | 40401452 ~ 40404840 (+) |
| G1739440 | vax2 | other | downstream | 380869 | 42501349 ~ 42502357 (+) |
| G1740312 | r1441 | other | downstream | 1135173 | 43255653 ~ 43327738 (+) |
| LOC110500499 | ubil | other | downstream | 1146734 | 43267057 ~ 43268143 (+) |
