G1739301


Basic Information

Item Value
gene id G1739301
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 42251422 ~ 42251645 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1991875
agtcatcTTCCATCAGCTGCCAGTTCCACCTCAACTTCATAACTTGACAACCGAGGCAGATCACTGGAAGCGACTAGGTTGCACACTCACTGTAAAGTGGTGTAGTGGTAGCCGAATGCCTGTTGATTCACTATCGCTCATTTTGCCATGCACATTCTCCCTTGTCGTCACCCTGCTGTCTCGGGGGCTCGCGCGCATCTGCATGCATCTCGAGCGTTCCGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1991875 True 224 lncRNA 0.53 1 42251422 42251645

Neighbor

gene id symbol gene type direction distance location
LOC110500456 LOC106608882 coding upstream 30798 42213444 ~ 42220624 (+)
LOC110500450 clcn3 coding upstream 66418 42119272 ~ 42185004 (+)
LOC118942801 NA coding upstream 119096 42120391 ~ 42132326 (+)
trnas-gcu-264 NA coding upstream 160701 42090640 ~ 42090721 (+)
trnas-gcu-263 NA coding upstream 162672 42088669 ~ 42088750 (+)
cxcl8c cxcl8c coding downstream 33484 42285056 ~ 42288500 (+)
si:dkey-185m8.2 LOC106608874 coding downstream 102911 42354556 ~ 42370239 (+)
si:ch211-1o7.2 ankrd53 coding downstream 156005 42407650 ~ 42410829 (+)
LOC110500464 NA coding downstream 221622 42473267 ~ 42482530 (+)
trnak-cuu-149 NA coding downstream 292739 42544384 ~ 42544456 (+)
G1739298 LOC106608879 non-coding upstream 4529 42246311 ~ 42246893 (+)
G1739297 NA non-coding upstream 5672 42245530 ~ 42245750 (+)
G1739294 NA non-coding upstream 11028 42240118 ~ 42240394 (+)
G1739293 NA non-coding upstream 12221 42238757 ~ 42239201 (+)
G1739290 NA non-coding upstream 19930 42231214 ~ 42231492 (+)
G1739366 NA non-coding downstream 99118 42350763 ~ 42350977 (+)
G1739370 NA non-coding downstream 107989 42359634 ~ 42359935 (+)
G1739374 NA non-coding downstream 127027 42378672 ~ 42379089 (+)
G1739385 NA non-coding downstream 130746 42382391 ~ 42382726 (+)
G1739397 NA non-coding downstream 138470 42390115 ~ 42390392 (+)
G1739103 NA other upstream 353566 41888811 ~ 41897856 (+)
G1738119 NA other upstream 1222286 41024710 ~ 41029136 (+)
G1738057 LOC100194703 other upstream 1254102 40955050 ~ 40997320 (+)
G1737866 LOC103384823 other upstream 1697569 40552011 ~ 40553853 (+)
LOC110500409 LOC106599480 other upstream 1847737 40401452 ~ 40404840 (+)
G1739440 vax2 other downstream 249704 42501349 ~ 42502357 (+)
G1740312 r1441 other downstream 1004008 43255653 ~ 43327738 (+)
LOC110500499 ubil other downstream 1015569 43267057 ~ 43268143 (+)

Expression


Co-expression Network