G1739374


Basic Information

Item Value
gene id G1739374
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 42378672 ~ 42379089 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1991952
ATAATGTTGTGTTTGTGATTTCACTTTTTACGTGCTTTGAGATTCTTTGAAAAGCACTACACAATTTTtcaaaaattatatatttttgtattgaGATTACGTAGAAGTttccattaaaaaatatatatatgtacaccgaacaaaaatataaacgcaacatgcaacaatttcaaagattttactgagttacagttcatataaggaaatcagtccatttaaataaaatcattaggccctaatctatggatttcacatgactgggaatacagatatgttggtcacagatacctttaaaaaaaaagtaggggagtggaacagaaaaccagtcacctggtgtgaccaccatttgcctcatgcagagtgacacatctccttcacatagagttgatcaggctgttgattgtggactgttgaatgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1991952 True 418 lncRNA 0.33 1 42378672 42379089

Neighbor

gene id symbol gene type direction distance location
si:dkey-185m8.2 LOC106608874 coding upstream 8433 42354556 ~ 42370239 (+)
cxcl8c cxcl8c coding upstream 91810 42285056 ~ 42288500 (+)
LOC110500456 LOC106608882 coding upstream 158048 42213444 ~ 42220624 (+)
LOC110500450 clcn3 coding upstream 193668 42119272 ~ 42185004 (+)
LOC118942801 NA coding upstream 246346 42120391 ~ 42132326 (+)
si:ch211-1o7.2 ankrd53 coding downstream 28561 42407650 ~ 42410829 (+)
LOC110500464 NA coding downstream 94178 42473267 ~ 42482530 (+)
trnak-cuu-149 NA coding downstream 165295 42544384 ~ 42544456 (+)
trnan-guu-198 NA coding downstream 167978 42547067 ~ 42547140 (+)
LOC110500468 LOC106608867 coding downstream 190143 42569232 ~ 42586213 (+)
G1739370 NA non-coding upstream 18737 42359634 ~ 42359935 (+)
G1739366 NA non-coding upstream 27695 42350763 ~ 42350977 (+)
G1739301 NA non-coding upstream 127027 42251422 ~ 42251645 (+)
G1739298 LOC106608879 non-coding upstream 131779 42246311 ~ 42246893 (+)
G1739297 NA non-coding upstream 132922 42245530 ~ 42245750 (+)
G1739385 NA non-coding downstream 3302 42382391 ~ 42382726 (+)
G1739397 NA non-coding downstream 11026 42390115 ~ 42390392 (+)
G1739398 NA non-coding downstream 11689 42390778 ~ 42391131 (+)
G1739407 NA non-coding downstream 23226 42402315 ~ 42402749 (+)
G1739408 NA non-coding downstream 24625 42403714 ~ 42404009 (+)
G1739103 NA other upstream 480816 41888811 ~ 41897856 (+)
G1738119 NA other upstream 1349536 41024710 ~ 41029136 (+)
G1738057 LOC100194703 other upstream 1381352 40955050 ~ 40997320 (+)
G1739440 vax2 other downstream 122260 42501349 ~ 42502357 (+)
G1740312 r1441 other downstream 876564 43255653 ~ 43327738 (+)
LOC110500499 ubil other downstream 888125 43267057 ~ 43268143 (+)
G1740366 LOC106608832 other downstream 1010100 43389189 ~ 43390299 (+)
G1740398 NA other downstream 1067961 43447050 ~ 43451167 (+)

Expression


Co-expression Network