G1739385


Basic Information

Item Value
gene id G1739385
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 42382391 ~ 42382726 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1991965
acttatgtcatgcaataaaatgcaaatgaaatacttaaaaatcatacaatgtgattttctggatttttgttttagattccgtctctcaccgttgaagtgtacctatgataaaaattacagacctctacatgctttgtaagtaggaaaacctgcaaaatcggcagtgtatcaaatacttgttctccccactgtataaccGTTCTCATTCCAGATATctgtatacatctctctctctcatccctctctatctcatgccctctatttctatttctctcttcACGTTTTTAAATGATTTGTGCATAATTTATTTCCCCATTAATGTTTGTCCCTTTTAGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1991965 True 336 lncRNA 0.35 1 42382391 42382726

Neighbor

gene id symbol gene type direction distance location
si:dkey-185m8.2 LOC106608874 coding upstream 12152 42354556 ~ 42370239 (+)
cxcl8c cxcl8c coding upstream 95529 42285056 ~ 42288500 (+)
LOC110500456 LOC106608882 coding upstream 161767 42213444 ~ 42220624 (+)
LOC110500450 clcn3 coding upstream 197387 42119272 ~ 42185004 (+)
si:ch211-1o7.2 ankrd53 coding downstream 24924 42407650 ~ 42410829 (+)
LOC110500464 NA coding downstream 90541 42473267 ~ 42482530 (+)
trnak-cuu-149 NA coding downstream 161658 42544384 ~ 42544456 (+)
trnan-guu-198 NA coding downstream 164341 42547067 ~ 42547140 (+)
LOC110500468 LOC106608867 coding downstream 186506 42569232 ~ 42586213 (+)
G1739374 NA non-coding upstream 3302 42378672 ~ 42379089 (+)
G1739370 NA non-coding upstream 22456 42359634 ~ 42359935 (+)
G1739366 NA non-coding upstream 31414 42350763 ~ 42350977 (+)
G1739301 NA non-coding upstream 130746 42251422 ~ 42251645 (+)
G1739298 LOC106608879 non-coding upstream 135498 42246311 ~ 42246893 (+)
G1739397 NA non-coding downstream 7389 42390115 ~ 42390392 (+)
G1739398 NA non-coding downstream 8052 42390778 ~ 42391131 (+)
G1739407 NA non-coding downstream 19589 42402315 ~ 42402749 (+)
G1739408 NA non-coding downstream 20988 42403714 ~ 42404009 (+)
G1739422 NA non-coding downstream 80086 42462812 ~ 42463150 (+)
G1739103 NA other upstream 484535 41888811 ~ 41897856 (+)
G1738119 NA other upstream 1353255 41024710 ~ 41029136 (+)
G1738057 LOC100194703 other upstream 1385071 40955050 ~ 40997320 (+)
G1739440 vax2 other downstream 118623 42501349 ~ 42502357 (+)
G1740312 r1441 other downstream 872927 43255653 ~ 43327738 (+)
LOC110500499 ubil other downstream 884488 43267057 ~ 43268143 (+)
G1740366 LOC106608832 other downstream 1006463 43389189 ~ 43390299 (+)
G1740398 NA other downstream 1064324 43447050 ~ 43451167 (+)

Expression


Co-expression Network