Gene
RNA
| Item | Value |
|---|---|
| gene id | G1739407 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 42402315 ~ 42402749 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1991987 | True | 435 | lncRNA | 0.45 | 1 | 42402315 | 42402749 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-185m8.2 | LOC106608874 | coding | upstream | 32076 | 42354556 ~ 42370239 (+) |
| cxcl8c | cxcl8c | coding | upstream | 115453 | 42285056 ~ 42288500 (+) |
| LOC110500456 | LOC106608882 | coding | upstream | 181691 | 42213444 ~ 42220624 (+) |
| LOC110500450 | clcn3 | coding | upstream | 217311 | 42119272 ~ 42185004 (+) |
| si:ch211-1o7.2 | ankrd53 | coding | downstream | 4901 | 42407650 ~ 42410829 (+) |
| LOC110500464 | NA | coding | downstream | 70518 | 42473267 ~ 42482530 (+) |
| trnak-cuu-149 | NA | coding | downstream | 141635 | 42544384 ~ 42544456 (+) |
| trnan-guu-198 | NA | coding | downstream | 144318 | 42547067 ~ 42547140 (+) |
| LOC110500468 | LOC106608867 | coding | downstream | 166483 | 42569232 ~ 42586213 (+) |
| G1739398 | NA | non-coding | upstream | 11184 | 42390778 ~ 42391131 (+) |
| G1739397 | NA | non-coding | upstream | 11923 | 42390115 ~ 42390392 (+) |
| G1739385 | NA | non-coding | upstream | 19589 | 42382391 ~ 42382726 (+) |
| G1739374 | NA | non-coding | upstream | 23226 | 42378672 ~ 42379089 (+) |
| G1739370 | NA | non-coding | upstream | 42380 | 42359634 ~ 42359935 (+) |
| G1739408 | NA | non-coding | downstream | 965 | 42403714 ~ 42404009 (+) |
| G1739422 | NA | non-coding | downstream | 60063 | 42462812 ~ 42463150 (+) |
| G1739430 | vax2 | non-coding | downstream | 76992 | 42479741 ~ 42480166 (+) |
| G1739434 | NA | non-coding | downstream | 88689 | 42491438 ~ 42491805 (+) |
| G1739103 | NA | other | upstream | 504459 | 41888811 ~ 41897856 (+) |
| G1738119 | NA | other | upstream | 1373179 | 41024710 ~ 41029136 (+) |
| G1738057 | LOC100194703 | other | upstream | 1404995 | 40955050 ~ 40997320 (+) |
| G1739440 | vax2 | other | downstream | 98600 | 42501349 ~ 42502357 (+) |
| G1740312 | r1441 | other | downstream | 852904 | 43255653 ~ 43327738 (+) |
| LOC110500499 | ubil | other | downstream | 864465 | 43267057 ~ 43268143 (+) |
| G1740366 | LOC106608832 | other | downstream | 986440 | 43389189 ~ 43390299 (+) |
| G1740398 | NA | other | downstream | 1044301 | 43447050 ~ 43451167 (+) |
