Gene
RNA
| Item | Value |
|---|---|
| gene id | G1739788 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 42507949 ~ 42508187 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1992420 | True | 239 | lncRNA | 0.44 | 1 | 42507949 | 42508187 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500464 | NA | coding | upstream | 25419 | 42473267 ~ 42482530 (+) |
| si:ch211-1o7.2 | ankrd53 | coding | upstream | 97120 | 42407650 ~ 42410829 (+) |
| si:dkey-185m8.2 | LOC106608874 | coding | upstream | 137710 | 42354556 ~ 42370239 (+) |
| cxcl8c | cxcl8c | coding | upstream | 221087 | 42285056 ~ 42288500 (+) |
| LOC110500456 | LOC106608882 | coding | upstream | 287325 | 42213444 ~ 42220624 (+) |
| trnak-cuu-149 | NA | coding | downstream | 36197 | 42544384 ~ 42544456 (+) |
| trnan-guu-198 | NA | coding | downstream | 38880 | 42547067 ~ 42547140 (+) |
| LOC110500468 | LOC106608867 | coding | downstream | 61045 | 42569232 ~ 42586213 (+) |
| faah2b | LOC106608863 | coding | downstream | 125206 | 42633393 ~ 42641281 (+) |
| c21h4orf48 | cssa07h4orf48 | coding | downstream | 147174 | 42655361 ~ 42661164 (+) |
| G1739438 | NA | non-coding | upstream | 10725 | 42496955 ~ 42497224 (+) |
| G1739434 | NA | non-coding | upstream | 16144 | 42491438 ~ 42491805 (+) |
| G1739430 | vax2 | non-coding | upstream | 27783 | 42479741 ~ 42480166 (+) |
| G1739422 | NA | non-coding | upstream | 44799 | 42462812 ~ 42463150 (+) |
| G1739831 | NA | non-coding | downstream | 74346 | 42582533 ~ 42584132 (+) |
| G1739836 | NA | non-coding | downstream | 84799 | 42592986 ~ 42599053 (+) |
| LOC110500846 | nat8l | non-coding | downstream | 181441 | 42676945 ~ 42692054 (+) |
| G1739867 | NA | non-coding | downstream | 184308 | 42692495 ~ 42694785 (+) |
| G1739440 | vax2 | other | upstream | 5592 | 42501349 ~ 42502357 (+) |
| G1739103 | NA | other | upstream | 610093 | 41888811 ~ 41897856 (+) |
| G1738119 | NA | other | upstream | 1478813 | 41024710 ~ 41029136 (+) |
| G1740312 | r1441 | other | downstream | 747466 | 43255653 ~ 43327738 (+) |
| LOC110500499 | ubil | other | downstream | 759027 | 43267057 ~ 43268143 (+) |
| G1740366 | LOC106608832 | other | downstream | 881002 | 43389189 ~ 43390299 (+) |
| G1740398 | NA | other | downstream | 938863 | 43447050 ~ 43451167 (+) |
| G1740412 | LOC106608825 | other | downstream | 961631 | 43469818 ~ 43470325 (+) |
