G1740103


Basic Information

Item Value
gene id G1740103
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 42836144 ~ 42838760 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1992789
GGAAAAAGGAAGTGGAGTGCATATTATTTCCTGGGAAATGTTGCTTTGTCATTCTATCCAGTCTAGGGATACTCAAGCACACTAGTTCTGTGGGTGGTCTGATAGTACTAGTATGTGTATTTGCAGGAACGACAaggacctgagccctaggaccatgcctcaggactacttggcatgatgactccttgctgtccccagtccacctggccgagctgctgctccagttttaactgttctgtCTGCGGATATGGAACCCTAACcagttcactggacgtgctac

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1992789 True 280 lncRNA 0.49 2 42836144 42838760

Neighbor

gene id symbol gene type direction distance location
LOC110500479 LOC106608859 coding upstream 2050 42821715 ~ 42834094 (+)
LOC110500477 LOC106608861 coding upstream 35596 42790604 ~ 42800548 (+)
LOC110500846 nat8l coding upstream 145865 42676945 ~ 42692054 (+)
c21h4orf48 cssa07h4orf48 coding upstream 175049 42655361 ~ 42661164 (+)
faah2b LOC106608863 coding upstream 194863 42633393 ~ 42641281 (+)
LOC110500480 LOC106608857 coding downstream 163926 43002686 ~ 43034963 (+)
gmpr2 LOC106608854 coding downstream 203006 43041766 ~ 43055080 (+)
LOC110500484 LOC106608853 coding downstream 219752 43058512 ~ 43062374 (+)
tinf2 LOC106608852 coding downstream 235525 43074285 ~ 43079143 (+)
efs LOC106608851 coding downstream 259977 43098737 ~ 43112481 (+)
G1740101 NA non-coding upstream 15069 42819086 ~ 42821075 (+)
G1740100 NA non-coding upstream 18300 42817437 ~ 42817844 (+)
G1740099 NA non-coding upstream 18781 42817164 ~ 42817363 (+)
G1740098 NA non-coding upstream 19005 42816883 ~ 42817139 (+)
G1740097 NA non-coding upstream 21052 42814781 ~ 42815092 (+)
G1740127 LOC106608858 non-coding downstream 21086 42859846 ~ 42860278 (+)
G1740131 NA non-coding downstream 24935 42863695 ~ 42863924 (+)
G1740134 NA non-coding downstream 27958 42866718 ~ 42867152 (+)
G1740135 NA non-coding downstream 30473 42869233 ~ 42869452 (+)
G1740136 NA non-coding downstream 30864 42869624 ~ 42869832 (+)
G1739440 vax2 other upstream 333787 42501349 ~ 42502357 (+)
si:dkey-185m8.2 LOC106608874 other upstream 480817 42354556 ~ 42370239 (+)
cxcl8c cxcl8c other upstream 547644 42285056 ~ 42288500 (+)
G1739103 NA other upstream 938288 41888811 ~ 41897856 (+)
G1738119 NA other upstream 1807008 41024710 ~ 41029136 (+)
G1740312 r1441 other downstream 416893 43255653 ~ 43327738 (+)
LOC110500499 ubil other downstream 428454 43267057 ~ 43268143 (+)
G1740366 LOC106608832 other downstream 550429 43389189 ~ 43390299 (+)
G1740398 NA other downstream 608290 43447050 ~ 43451167 (+)
G1740412 LOC106608825 other downstream 631058 43469818 ~ 43470325 (+)

Expression


Co-expression Network