G1740134


Basic Information

Item Value
gene id G1740134
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 42866718 ~ 42867152 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1992820
AAGGTGACACCAAGAATATTAATTTCCTCTACTTGCTCAACAGACACACCATTCTTTTACCAGACTCAGCTGAAGTCTCGAACGTAGGGATTGATTAgtgccaaatacaatgctcttagttttagagatgttcaggactagtttattactagccacccattccaaaacggactgcaactctttgtttaggGTCTATGGATAGATACAGTATCTCTCAGCCCATGACATGGTAGAAGATGTAAAGCCACAACATATACATTTCTTCCACTAACAGATGtcaataacatcaaaggctgcactacagtctaacaatacagctcccacaatcttcttaccATCAATTTCTTTTAGCCAATCATCAGTTATTTGTGTCAGCACAgtgcatgttgagtgcccttctctatcaGAATGCTGAAAGTCTGGTGTGGCATTGTT

Function

NR:

description
PREDICTED: activated CDC42 kinase 1-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1992820 True 435 lncRNA 0.40 1 42866718 42867152

Neighbor

gene id symbol gene type direction distance location
LOC110500479 LOC106608859 coding upstream 32624 42821715 ~ 42834094 (+)
LOC110500477 LOC106608861 coding upstream 66170 42790604 ~ 42800548 (+)
LOC110500846 nat8l coding upstream 176439 42676945 ~ 42692054 (+)
c21h4orf48 cssa07h4orf48 coding upstream 205623 42655361 ~ 42661164 (+)
faah2b LOC106608863 coding upstream 225437 42633393 ~ 42641281 (+)
LOC110500480 LOC106608857 coding downstream 135534 43002686 ~ 43034963 (+)
gmpr2 LOC106608854 coding downstream 174614 43041766 ~ 43055080 (+)
LOC110500484 LOC106608853 coding downstream 191360 43058512 ~ 43062374 (+)
tinf2 LOC106608852 coding downstream 207133 43074285 ~ 43079143 (+)
efs LOC106608851 coding downstream 231585 43098737 ~ 43112481 (+)
G1740131 NA non-coding upstream 2794 42863695 ~ 42863924 (+)
G1740127 LOC106608858 non-coding upstream 6440 42859846 ~ 42860278 (+)
G1740103 NA non-coding upstream 27958 42836144 ~ 42838760 (+)
G1740101 NA non-coding upstream 45643 42819086 ~ 42821075 (+)
G1740100 NA non-coding upstream 48874 42817437 ~ 42817844 (+)
G1740135 NA non-coding downstream 2081 42869233 ~ 42869452 (+)
G1740136 NA non-coding downstream 2472 42869624 ~ 42869832 (+)
G1740137 NA non-coding downstream 3592 42870744 ~ 42870944 (+)
G1740139 LOC106608858 non-coding downstream 8263 42875415 ~ 42875636 (+)
G1740142 NA non-coding downstream 15367 42882519 ~ 42882877 (+)
G1739440 vax2 other upstream 364361 42501349 ~ 42502357 (+)
si:dkey-185m8.2 LOC106608874 other upstream 511391 42354556 ~ 42370239 (+)
cxcl8c cxcl8c other upstream 578218 42285056 ~ 42288500 (+)
G1739103 NA other upstream 968862 41888811 ~ 41897856 (+)
G1738119 NA other upstream 1837582 41024710 ~ 41029136 (+)
G1740312 r1441 other downstream 388501 43255653 ~ 43327738 (+)
LOC110500499 ubil other downstream 400062 43267057 ~ 43268143 (+)
G1740366 LOC106608832 other downstream 522037 43389189 ~ 43390299 (+)
G1740398 NA other downstream 579898 43447050 ~ 43451167 (+)
G1740412 LOC106608825 other downstream 602666 43469818 ~ 43470325 (+)

Expression


Co-expression Network