G1740162


Basic Information

Item Value
gene id G1740162
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 42915508 ~ 42915730 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1992848
gagtaaaggtggtctagagtttattTTCCTCtcgttgcacatgtgacatgctggtggaaggtcaaactgatttaagtttgcctgcattgaagtccccggccactagcagcgccgcttctggatgagcatttccttgtttgcttatggccttatagagttggttgagtgcggtctcagttccagcatcggtctgtggtggtaaataaacggctacgaataatat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1992848 True 223 lncRNA 0.47 1 42915508 42915730

Neighbor

gene id symbol gene type direction distance location
LOC110500479 LOC106608859 coding upstream 81414 42821715 ~ 42834094 (+)
LOC110500477 LOC106608861 coding upstream 114960 42790604 ~ 42800548 (+)
LOC110500846 nat8l coding upstream 225229 42676945 ~ 42692054 (+)
c21h4orf48 cssa07h4orf48 coding upstream 254413 42655361 ~ 42661164 (+)
faah2b LOC106608863 coding upstream 274227 42633393 ~ 42641281 (+)
LOC110500480 LOC106608857 coding downstream 86956 43002686 ~ 43034963 (+)
gmpr2 LOC106608854 coding downstream 126036 43041766 ~ 43055080 (+)
LOC110500484 LOC106608853 coding downstream 142782 43058512 ~ 43062374 (+)
tinf2 LOC106608852 coding downstream 158555 43074285 ~ 43079143 (+)
efs LOC106608851 coding downstream 183007 43098737 ~ 43112481 (+)
G1740161 NA non-coding upstream 1118 42914189 ~ 42914390 (+)
G1740142 NA non-coding upstream 32631 42882519 ~ 42882877 (+)
G1740139 LOC106608858 non-coding upstream 39872 42875415 ~ 42875636 (+)
G1740137 NA non-coding upstream 44564 42870744 ~ 42870944 (+)
G1740136 NA non-coding upstream 45676 42869624 ~ 42869832 (+)
G1740206 NA non-coding downstream 65723 42981453 ~ 42981792 (+)
G1740209 NA non-coding downstream 68821 42984551 ~ 42985006 (+)
G1740210 NA non-coding downstream 69371 42985101 ~ 42985377 (+)
G1740211 NA non-coding downstream 72035 42987765 ~ 42988281 (+)
LOC110500494 LOC106608896 non-coding downstream 242958 43158688 ~ 43161693 (+)
G1739440 vax2 other upstream 413151 42501349 ~ 42502357 (+)
si:dkey-185m8.2 LOC106608874 other upstream 560181 42354556 ~ 42370239 (+)
cxcl8c cxcl8c other upstream 627008 42285056 ~ 42288500 (+)
G1739103 NA other upstream 1017652 41888811 ~ 41897856 (+)
G1738119 NA other upstream 1886372 41024710 ~ 41029136 (+)
G1740312 r1441 other downstream 339923 43255653 ~ 43327738 (+)
LOC110500499 ubil other downstream 351484 43267057 ~ 43268143 (+)
G1740366 LOC106608832 other downstream 473459 43389189 ~ 43390299 (+)
G1740398 NA other downstream 531320 43447050 ~ 43451167 (+)
G1740412 LOC106608825 other downstream 554088 43469818 ~ 43470325 (+)

Expression


Co-expression Network