G1740211


Basic Information

Item Value
gene id G1740211
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 42987765 ~ 42988281 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1992923
ttcttcttcttcttcttcttcttcttcttcttcttctgccttttcttcttcttcttcttctgccttttcttcttcttcttcttcttctgcctgttcttcttcttcttcttcttcttcttcttctgccttttcttcttcttcttcttcttcttctgccttttcttcttcttcttcttcttctgccgtttcttcttcttcttcttcttctgccttttcttcttcttcttcttcttctgccttttcttcttcttctatgctCCTTTTTGCTTCTAGCCTCATTTCTTCCCCCCTACACTTCGTTATGGTTCTCCTTCTATACTCTTTCTTCACCTCTAGCTCCCTCCCTGTAATCTTTTTGTCTTAGATATTTTGTGGTTTTCATTTCTCATTTTTGCACGGATCCCCCTTCCCGCCTATCATTCTTCTCTCTATGCATTTCTCATCTGCCAATTATTTcgaccctctgtctctccctctctctctcaccaacgtCTCCTGTGTGTTAGCAGGCATTGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1992923 True 517 lncRNA 0.41 1 42987765 42988281

Neighbor

gene id symbol gene type direction distance location
LOC110500479 LOC106608859 coding upstream 153671 42821715 ~ 42834094 (+)
LOC110500477 LOC106608861 coding upstream 187217 42790604 ~ 42800548 (+)
LOC110500846 nat8l coding upstream 297486 42676945 ~ 42692054 (+)
c21h4orf48 cssa07h4orf48 coding upstream 326670 42655361 ~ 42661164 (+)
faah2b LOC106608863 coding upstream 346484 42633393 ~ 42641281 (+)
LOC110500480 LOC106608857 coding downstream 14405 43002686 ~ 43034963 (+)
gmpr2 LOC106608854 coding downstream 53485 43041766 ~ 43055080 (+)
LOC110500484 LOC106608853 coding downstream 70231 43058512 ~ 43062374 (+)
tinf2 LOC106608852 coding downstream 86004 43074285 ~ 43079143 (+)
efs LOC106608851 coding downstream 110456 43098737 ~ 43112481 (+)
G1740210 NA non-coding upstream 2388 42985101 ~ 42985377 (+)
G1740209 NA non-coding upstream 2759 42984551 ~ 42985006 (+)
G1740206 NA non-coding upstream 5973 42981453 ~ 42981792 (+)
G1740162 NA non-coding upstream 72035 42915508 ~ 42915730 (+)
G1740161 NA non-coding upstream 73375 42914189 ~ 42914390 (+)
LOC110500494 LOC106608896 non-coding downstream 170407 43158688 ~ 43161693 (+)
G1740274 NA non-coding downstream 180982 43169263 ~ 43169540 (+)
G1740276 NA non-coding downstream 183095 43171376 ~ 43171589 (+)
G1740299 NA non-coding downstream 211626 43199907 ~ 43200289 (+)
G1740301 NA non-coding downstream 214141 43202422 ~ 43202626 (+)
G1739440 vax2 other upstream 485408 42501349 ~ 42502357 (+)
si:dkey-185m8.2 LOC106608874 other upstream 632438 42354556 ~ 42370239 (+)
cxcl8c cxcl8c other upstream 699265 42285056 ~ 42288500 (+)
G1739103 NA other upstream 1089909 41888811 ~ 41897856 (+)
G1738119 NA other upstream 1958629 41024710 ~ 41029136 (+)
G1740312 r1441 other downstream 267372 43255653 ~ 43327738 (+)
LOC110500499 ubil other downstream 278933 43267057 ~ 43268143 (+)
G1740366 LOC106608832 other downstream 400908 43389189 ~ 43390299 (+)
G1740398 NA other downstream 458769 43447050 ~ 43451167 (+)
G1740412 LOC106608825 other downstream 481537 43469818 ~ 43470325 (+)

Expression


Co-expression Network