G1740927


Basic Information

Item Value
gene id G1740927
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 43142639 ~ 43144422 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1993745
CATTTAaacttttacatttattttgaattcTTTGTACATTCAGCACTTACAGGAGAAAAAAAAGAGCCAAATAAGAATCAGTTTCAAACTAATTAAAAACAATATTAAAACAGTAATAATCTAAGTTAAACTCATCCGATGTCTGATTCATTTACAAAAAGAACTGGGAGGGTCGTGGGTACACTGAGTGAATAAGAAGGAAGAGAGCAAGAAAGGGATAGTTTCACATGTTGGGACAGTTTCACATCGTGCCACACGGATTCTCTCAGTGCGTTTGGACTCCCCCTACCCAAACAACCTAAAAAGAACCGTATACATGCCAAGTGTGCGCAAATGAAATCAGCCCCCCACCCAACACAAAAATGTCCCTACCCCTCTGACAAGGCAAAAAGATAGTTTCCTAATTTTCTTAAACATATGCTGCTTTCAGTGTAATGACACATTAACCAACTTGAACCTTagtgtgtggagagagggagagcagagcaccaccacacacacactagaacacaCAAAAACCATCCAAGGCTGAGATTTACATGATTCATCATAATAAAACGTCAAAGCAGAAAAAATAACCTTCACATGACCCTACAAAGGGCCTTGGTACCGGTCGTAGAAAAAATAACTTTTGAAATACTAAAATTGATTCTAGAACACATTTGGGGGTTGGTAAACTGGGCTGCTATTTTTAAATGGATTATTACAGGGAAGAGTCTTATTACTGTGTGCCCGCAGAGATTGGTGGAACAAGACTCGGCCTCGAGGCAAACCTCCACCCTTTATTTCCATTTCTGGTTAAAATGCATGAGAATTTCCAGAGCTCAGAATAGGCCTCTGGACTGCTTCATATGAGAAGCTTGAGACAGATGAGACAGCTataggaggaagagggagagcgaaaatgtcaccatatctattccctatatagtacactacttttgacgggGGCCAtcatataggaaatagggtgccattttggaggcAGACATTTTTCAGTTCACTAAACTATCAACATGTGACCAAAGTCCATACATGTAGATTTTTATGGTcatgtgagagacagacagcattACTGAGTGAGGATTTGGGGTTTTCTAAATAGGAGTCTCCCTGGCCCAAAGGACAGGATAGCCAGAAGAGGAACAGCCTGTTAACCTGAAGACTATGGAAGTGGTTTTAATGTAAAGGAGGGGGACTAGAAATCTCTTTCTGCTGTGTTCCAATTGTATGTTGAATGAGGGACTGCATCCATCCTTttttcctcctccccatctctctcactccgTCAAACTGAACACTCAACGGCGTTTGTCACGGGGGTTGCTACGGCTACGGGAGCGTCGGAACCCAGCAGAGGGTTTAGTATCAGGACCTCTGGGTCTGAATCCACCActgtccctcctcttctccccctctctctccctcccacgctccctctctccctcagatcCCCGGACACTCACACTTCCAGTGCTTACCGcagctcctccctccttctctctgcttttaattctctcctttctctcctcctctcgcttcttgtcctcctcctcctgctgttctTTCCGCctcctctctcgttctttctGTCGCTCTTCCCGTTCTTTTCCCCTCTGGTTTGCctgttCTTCAGTGAGAGGGAGCCAGTATATACAGGGAGCTGCTTTGGTCTTATTGAAGAGGTCATCTAGTAATTT

Function

NR:

description
apoptotic chromatin condensation inducer in the nucleus-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1993745 True 1700 TUCP 0.44 2 43142639 43144422
Loading

Neighbor

gene id symbol gene type direction distance location
dhrs4 LOC106608855 coding downstream 59769 43079217 ~ 43082870 (-)
LOC110500486 cideb coding downstream 71239 43062367 ~ 43071400 (-)
LOC110500482 LOC106608856 coding downstream 101085 43039949 ~ 43041554 (-)
LOC110500478 LOC106608858 coding downstream 177723 42834803 ~ 42964916 (-)
haus3 haus3 coding downstream 331801 42778252 ~ 42810838 (-)
ajuba LOC106608849 coding upstream 661 43145083 ~ 43157529 (-)
mmp14a LOC106608848 coding upstream 28498 43172920 ~ 43197720 (-)
si:ch211-212k18.15 r1441 coding upstream 111229 43255651 ~ 43267007 (-)
slc7a7 LOC106608835 coding upstream 210275 43354697 ~ 43371541 (-)
LOC110500508 LOC106608834 coding upstream 229456 43373878 ~ 43381160 (-)
G1740999 NA non-coding downstream 58761 43083640 ~ 43083878 (-)
G1740993 NA non-coding downstream 70716 43071678 ~ 43071923 (-)
G1740929 LOC106608853 non-coding downstream 81434 43056525 ~ 43061205 (-)
G1740985 NA non-coding downstream 87572 43052857 ~ 43055067 (-)
G1740964 NA non-coding downstream 154301 42987944 ~ 42988338 (-)
G1741035 NA non-coding upstream 14473 43158895 ~ 43160308 (-)
G1741043 NA non-coding upstream 24382 43168804 ~ 43169050 (-)
G1740932 LOC106608847 non-coding upstream 67376 43211798 ~ 43216587 (-)
G1740935 LOC106608847 non-coding upstream 68265 43212687 ~ 43217125 (-)
G1741092 NA non-coding upstream 115817 43260239 ~ 43262155 (-)
nelfa nelfa other downstream 498695 42642148 ~ 42654789 (-)
G1739712 NA other downstream 788778 42353448 ~ 42353861 (-)
G1739063 NA other downstream 1369184 41772845 ~ 41773455 (-)
G1738673 NA other downstream 1979836 41162120 ~ 41162803 (-)
G1741082 LOC106608843 other upstream 97858 43242280 ~ 43244033 (-)
LOC110500511 tmem88 other upstream 303350 43447034 ~ 43456466 (-)
G1741207 NA other upstream 358921 43503343 ~ 43504854 (-)
dnah2 dnah2 other upstream 479412 43623631 ~ 43841205 (-)
LOC110500515 gigyf1 other upstream 903295 44047717 ~ 44097779 (-)

Expression

G1740927 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 60.
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G1740927 Expression in each Bioproject

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G1740927 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 600.
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Co-expression Network