Gene
RNA
| Item | Value |
|---|---|
| gene id | G1740276 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 43171376 ~ 43171589 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1992989 | True | 214 | lncRNA | 0.50 | 1 | 43171376 | 43171589 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500494 | LOC106608896 | coding | upstream | 9683 | 43158688 ~ 43161693 (+) |
| LOC110500490 | LOC106608850 | coding | upstream | 26953 | 43112790 ~ 43144423 (+) |
| LOC110500496 | LOC106608847 | coding | downstream | 31950 | 43203539 ~ 43219682 (+) |
| LOC118942803 | LOC106608806 | coding | downstream | 50750 | 43222339 ~ 43232208 (+) |
| LOC110500497 | LOC106608843 | coding | downstream | 63057 | 43234646 ~ 43245107 (+) |
| LOC110500499 | ubil | coding | downstream | 95468 | 43267057 ~ 43268143 (+) |
| LOC110500500 | LOC106596943 | coding | downstream | 97021 | 43268610 ~ 43278166 (+) |
| G1740274 | NA | non-coding | upstream | 1836 | 43169263 ~ 43169540 (+) |
| G1740211 | NA | non-coding | upstream | 183095 | 42987765 ~ 42988281 (+) |
| G1740210 | NA | non-coding | upstream | 185999 | 42985101 ~ 42985377 (+) |
| G1740209 | NA | non-coding | upstream | 186370 | 42984551 ~ 42985006 (+) |
| G1740299 | NA | non-coding | downstream | 28318 | 43199907 ~ 43200289 (+) |
| G1740301 | NA | non-coding | downstream | 30833 | 43202422 ~ 43202626 (+) |
| G1740335 | NA | non-coding | downstream | 156806 | 43328395 ~ 43328602 (+) |
| G1740336 | LOC106565892 | non-coding | downstream | 157314 | 43328903 ~ 43329165 (+) |
| G1740337 | NA | non-coding | downstream | 158481 | 43330070 ~ 43330342 (+) |
| G1739440 | vax2 | other | upstream | 669019 | 42501349 ~ 42502357 (+) |
| si:dkey-185m8.2 | LOC106608874 | other | upstream | 816049 | 42354556 ~ 42370239 (+) |
| cxcl8c | cxcl8c | other | upstream | 882876 | 42285056 ~ 42288500 (+) |
| G1739103 | NA | other | upstream | 1273520 | 41888811 ~ 41897856 (+) |
| G1738119 | NA | other | upstream | 2142240 | 41024710 ~ 41029136 (+) |
| G1740312 | r1441 | other | downstream | 84064 | 43255653 ~ 43327738 (+) |
| G1740366 | LOC106608832 | other | downstream | 217600 | 43389189 ~ 43390299 (+) |
| G1740398 | NA | other | downstream | 275461 | 43447050 ~ 43451167 (+) |
| G1740412 | LOC106608825 | other | downstream | 298229 | 43469818 ~ 43470325 (+) |
