G1740301


Basic Information

Item Value
gene id G1740301
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 43202422 ~ 43202626 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1993024
gtaaatagcccatccaactaccgcatcctcatattgttatttattattttgctcctttgcacccaagtatctctacttgcacattcatcttctgcacatctatcactccagtgtttaaatgctaaattgtaattacatcGCCACtgcggcctatttattgccttacctccctaatcttacctcatttgcacacactgtatataga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1993024 True 205 lncRNA 0.39 1 43202422 43202626

Neighbor

gene id symbol gene type direction distance location
LOC110500494 LOC106608896 coding upstream 40729 43158688 ~ 43161693 (+)
LOC110500490 LOC106608850 coding upstream 57999 43112790 ~ 43144423 (+)
LOC110500496 LOC106608847 coding downstream 913 43203539 ~ 43219682 (+)
LOC118942803 LOC106608806 coding downstream 19713 43222339 ~ 43232208 (+)
LOC110500497 LOC106608843 coding downstream 32020 43234646 ~ 43245107 (+)
LOC110500499 ubil coding downstream 64431 43267057 ~ 43268143 (+)
LOC110500500 LOC106596943 coding downstream 65984 43268610 ~ 43278166 (+)
G1740299 NA non-coding upstream 2133 43199907 ~ 43200289 (+)
G1740276 NA non-coding upstream 30833 43171376 ~ 43171589 (+)
G1740274 NA non-coding upstream 32882 43169263 ~ 43169540 (+)
G1740211 NA non-coding upstream 214141 42987765 ~ 42988281 (+)
G1740335 NA non-coding downstream 125769 43328395 ~ 43328602 (+)
G1740336 LOC106565892 non-coding downstream 126277 43328903 ~ 43329165 (+)
G1740337 NA non-coding downstream 127444 43330070 ~ 43330342 (+)
G1740339 NA non-coding downstream 129504 43332130 ~ 43332567 (+)
G1740340 NA non-coding downstream 130850 43333476 ~ 43333693 (+)
G1739440 vax2 other upstream 700065 42501349 ~ 42502357 (+)
si:dkey-185m8.2 LOC106608874 other upstream 847095 42354556 ~ 42370239 (+)
cxcl8c cxcl8c other upstream 913922 42285056 ~ 42288500 (+)
G1739103 NA other upstream 1304566 41888811 ~ 41897856 (+)
G1738119 NA other upstream 2173286 41024710 ~ 41029136 (+)
G1740312 r1441 other downstream 53027 43255653 ~ 43327738 (+)
G1740366 LOC106608832 other downstream 186563 43389189 ~ 43390299 (+)
G1740398 NA other downstream 244424 43447050 ~ 43451167 (+)
G1740412 LOC106608825 other downstream 267192 43469818 ~ 43470325 (+)

Expression


Co-expression Network