Gene
RNA
| Item | Value |
|---|---|
| gene id | G1740337 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 43330070 ~ 43330342 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1993070 | True | 273 | lncRNA | 0.41 | 1 | 43330070 | 43330342 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500503 | LOC106608839 | coding | upstream | 6196 | 43305093 ~ 43323874 (+) |
| LOC110500501 | NA | coding | upstream | 30765 | 43287190 ~ 43299305 (+) |
| LOC110500500 | LOC106596943 | coding | upstream | 51904 | 43268610 ~ 43278166 (+) |
| LOC110500499 | ubil | coding | upstream | 61928 | 43267057 ~ 43268143 (+) |
| LOC110500497 | LOC106608843 | coding | upstream | 84963 | 43234646 ~ 43245107 (+) |
| LOC110500504 | NA | coding | downstream | 5338 | 43335680 ~ 43345779 (+) |
| oxa1l | LOC106608836 | coding | downstream | 16072 | 43346414 ~ 43354437 (+) |
| LOC110500510 | ccnb1ip1 | coding | downstream | 52539 | 43382881 ~ 43385078 (+) |
| LOC118942788 | NA | coding | downstream | 67212 | 43397554 ~ 43404747 (+) |
| LOC110500847 | NA | coding | downstream | 75156 | 43405498 ~ 43409042 (+) |
| G1740336 | LOC106565892 | non-coding | upstream | 905 | 43328903 ~ 43329165 (+) |
| G1740335 | NA | non-coding | upstream | 1468 | 43328395 ~ 43328602 (+) |
| G1740301 | NA | non-coding | upstream | 127444 | 43202422 ~ 43202626 (+) |
| G1740299 | NA | non-coding | upstream | 129781 | 43199907 ~ 43200289 (+) |
| G1740276 | NA | non-coding | upstream | 158481 | 43171376 ~ 43171589 (+) |
| G1740339 | NA | non-coding | downstream | 1788 | 43332130 ~ 43332567 (+) |
| G1740340 | NA | non-coding | downstream | 3134 | 43333476 ~ 43333693 (+) |
| G1740345 | NA | non-coding | downstream | 14194 | 43344536 ~ 43371829 (+) |
| G1740367 | LOC106608832 | non-coding | downstream | 54885 | 43385227 ~ 43386232 (+) |
| G1740312 | r1441 | other | upstream | 2332 | 43255653 ~ 43327738 (+) |
| G1739440 | vax2 | other | upstream | 827713 | 42501349 ~ 42502357 (+) |
| si:dkey-185m8.2 | LOC106608874 | other | upstream | 974743 | 42354556 ~ 42370239 (+) |
| cxcl8c | cxcl8c | other | upstream | 1041570 | 42285056 ~ 42288500 (+) |
| G1740366 | LOC106608832 | other | downstream | 58847 | 43389189 ~ 43390299 (+) |
| G1740398 | NA | other | downstream | 116708 | 43447050 ~ 43451167 (+) |
| G1740412 | LOC106608825 | other | downstream | 139476 | 43469818 ~ 43470325 (+) |
| G1740453 | NA | other | downstream | 194394 | 43524736 ~ 43526726 (+) |
| G1740752 | NA | other | downstream | 882444 | 44212786 ~ 44213230 (+) |
