G1740427


Basic Information

Item Value
gene id G1740427
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 43489578 ~ 43489793 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1993180
ccactgtggtcttggggaccttcaatgctgcagaaatgttttggtacccttccttagatctgtgccttgacacaatcctgtctcggagctcttcggacaattccttcaacctcatggcttggtttttgctctgacacgcactgtcaactgtgggaccttatatagacagcggtgtacctttccaaatcatgtccaatgaattgaatttaccacagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1993180 True 216 lncRNA 0.47 1 43489578 43489793

Neighbor

gene id symbol gene type direction distance location
LOC110500847 NA coding upstream 80536 43405498 ~ 43409042 (+)
LOC118942788 NA coding upstream 84831 43397554 ~ 43404747 (+)
LOC110500510 ccnb1ip1 coding upstream 104500 43382881 ~ 43385078 (+)
oxa1l LOC106608836 coding upstream 135141 43346414 ~ 43354437 (+)
LOC110500504 NA coding upstream 143799 43335680 ~ 43345779 (+)
LOC118942933 NA coding downstream 523060 44012853 ~ 44019901 (+)
LOC110500517 LOC106608821 coding downstream 550159 44039952 ~ 44050765 (+)
pop7 pop7 coding downstream 608144 44097937 ~ 44099926 (+)
LOC110500520 LOC106608811 coding downstream 636289 44126082 ~ 44154069 (+)
ufsp1 ufsp1 coding downstream 636881 44126674 ~ 44128053 (+)
G1740426 NA non-coding upstream 1043 43488302 ~ 43488535 (+)
G1740425 NA non-coding upstream 1727 43487153 ~ 43487851 (+)
G1740422 NA non-coding upstream 5586 43483674 ~ 43483992 (+)
G1740421 NA non-coding upstream 6967 43482379 ~ 43482611 (+)
G1740420 NA non-coding upstream 7279 43481762 ~ 43482299 (+)
G1740430 NA non-coding downstream 2610 43492403 ~ 43492659 (+)
G1740431 NA non-coding downstream 3005 43492798 ~ 43493115 (+)
G1740432 NA non-coding downstream 4209 43494002 ~ 43494492 (+)
G1740452 NA non-coding downstream 34412 43524205 ~ 43524465 (+)
G1740453 NA non-coding downstream 34943 43524736 ~ 43526726 (+)
G1740412 LOC106608825 other upstream 19253 43469818 ~ 43470325 (+)
G1740398 NA other upstream 38411 43447050 ~ 43451167 (+)
G1740366 LOC106608832 other upstream 99279 43389189 ~ 43390299 (+)
G1740312 r1441 other upstream 161840 43255653 ~ 43327738 (+)
G1740752 NA other downstream 722993 44212786 ~ 44213230 (+)
LOC110500528 tmem256 other downstream 956767 44446186 ~ 44451532 (+)
LOC110500529 LOC106608720 other downstream 971589 44461338 ~ 44480565 (+)
fcer1g LOC106608748 other downstream 1954734 45444361 ~ 45449712 (+)

Expression


Co-expression Network