G1740431


Basic Information

Item Value
gene id G1740431
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 43492798 ~ 43493115 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1993184
caaagttcaagggggccgaatactttcgcaaggcactgtagcttcacggtttggttttgttctttgttttgtctgcgtcatttttaataaagagaaaatatacgcttaccatgctgcaccttggtccagtccttcagccagccgtgacatgGATTGAGTGTGTGTTCAGAGCAATGCATTAGAGATATATTGCTGAGTGTATTCACTGTTCATGATCTACTATCCTATGCACACGTCTGTTTGAGTGAGTTGCAAACTACACAGCTTTCAGTCATTAATGTACTCCATACCTGGgaggctgtgtgagtgtgtgtcgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1993184 True 318 lncRNA 0.44 1 43492798 43493115

Neighbor

gene id symbol gene type direction distance location
LOC110500847 NA coding upstream 83756 43405498 ~ 43409042 (+)
LOC118942788 NA coding upstream 88051 43397554 ~ 43404747 (+)
LOC110500510 ccnb1ip1 coding upstream 107720 43382881 ~ 43385078 (+)
oxa1l LOC106608836 coding upstream 138361 43346414 ~ 43354437 (+)
LOC110500504 NA coding upstream 147019 43335680 ~ 43345779 (+)
LOC118942933 NA coding downstream 519738 44012853 ~ 44019901 (+)
LOC110500517 LOC106608821 coding downstream 546837 44039952 ~ 44050765 (+)
pop7 pop7 coding downstream 604822 44097937 ~ 44099926 (+)
LOC110500520 LOC106608811 coding downstream 632967 44126082 ~ 44154069 (+)
ufsp1 ufsp1 coding downstream 633559 44126674 ~ 44128053 (+)
G1740430 NA non-coding upstream 139 43492403 ~ 43492659 (+)
G1740427 NA non-coding upstream 3005 43489578 ~ 43489793 (+)
G1740426 NA non-coding upstream 4263 43488302 ~ 43488535 (+)
G1740425 NA non-coding upstream 4947 43487153 ~ 43487851 (+)
G1740422 NA non-coding upstream 8806 43483674 ~ 43483992 (+)
G1740432 NA non-coding downstream 887 43494002 ~ 43494492 (+)
G1740452 NA non-coding downstream 31090 43524205 ~ 43524465 (+)
G1740453 NA non-coding downstream 31621 43524736 ~ 43526726 (+)
G1740457 NA non-coding downstream 40728 43533843 ~ 43534953 (+)
G1740507 NA non-coding downstream 144192 43637307 ~ 43637714 (+)
G1740412 LOC106608825 other upstream 22473 43469818 ~ 43470325 (+)
G1740398 NA other upstream 41631 43447050 ~ 43451167 (+)
G1740366 LOC106608832 other upstream 102499 43389189 ~ 43390299 (+)
G1740312 r1441 other upstream 165060 43255653 ~ 43327738 (+)
G1740752 NA other downstream 719671 44212786 ~ 44213230 (+)
LOC110500528 tmem256 other downstream 953445 44446186 ~ 44451532 (+)
LOC110500529 LOC106608720 other downstream 968267 44461338 ~ 44480565 (+)
fcer1g LOC106608748 other downstream 1951412 45444361 ~ 45449712 (+)

Expression


Co-expression Network