G1740432



Basic Information


Item Value
gene id G1740432
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 43494002 ~ 43494492 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1993185
CCTTAaggatgtgtgtatatgtgtgtgttgtgtgtgtagagggTAATTACAGTGTCTGGGCCTTCAGTaacgagaggagagggagtgggagaggaggactgcAGGGAGAGGGGAGCGAGTTCGGTTCTCATACTGCAGATATATATAGCATCCCTCTCATGGGTACAAGCCAAAAAGATTCTTGTCATTCCTACTTCACACAGACACATCATCTGTATAAagtacacgctcacacacacgcacgcacgcacacactacaTTATATAACATTAAtttgatgtcaaatcaaatcaaactttatttgtcacatgcgccgacaagtgtagaccttactgtgaagtgctgacttaaccaacagtgcagttcaagaaataaactaaagtaaaaaataatcaaaagtaacacaataaaataacaataacaaggctatatacagggggtaccggtacagagtcaatatgcgggggcaccggtgtcgaggtaatatgttc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1993185 True 491 lncRNA 0.42 1 43494002 43494492

Neighbor


gene id symbol gene type direction distance location
LOC110500847 NA coding upstream 84960 43405498 ~ 43409042 (+)
LOC118942788 NA coding upstream 89255 43397554 ~ 43404747 (+)
LOC110500510 ccnb1ip1 coding upstream 108924 43382881 ~ 43385078 (+)
oxa1l LOC106608836 coding upstream 139565 43346414 ~ 43354437 (+)
LOC110500504 NA coding upstream 148223 43335680 ~ 43345779 (+)
LOC118942933 NA coding downstream 518361 44012853 ~ 44019901 (+)
LOC110500517 LOC106608821 coding downstream 545460 44039952 ~ 44050765 (+)
pop7 pop7 coding downstream 603445 44097937 ~ 44099926 (+)
LOC110500520 LOC106608811 coding downstream 631590 44126082 ~ 44154069 (+)
ufsp1 ufsp1 coding downstream 632182 44126674 ~ 44128053 (+)
G1740431 NA non-coding upstream 887 43492798 ~ 43493115 (+)
G1740430 NA non-coding upstream 1343 43492403 ~ 43492659 (+)
G1740427 NA non-coding upstream 4209 43489578 ~ 43489793 (+)
G1740426 NA non-coding upstream 5467 43488302 ~ 43488535 (+)
G1740425 NA non-coding upstream 6151 43487153 ~ 43487851 (+)
G1740452 NA non-coding downstream 29713 43524205 ~ 43524465 (+)
G1740453 NA non-coding downstream 30244 43524736 ~ 43526726 (+)
G1740457 NA non-coding downstream 39351 43533843 ~ 43534953 (+)
G1740507 NA non-coding downstream 142815 43637307 ~ 43637714 (+)
G1740647 NA non-coding downstream 421516 43916008 ~ 43916279 (+)
G1740412 LOC106608825 other upstream 23677 43469818 ~ 43470325 (+)
G1740398 NA other upstream 42835 43447050 ~ 43451167 (+)
G1740366 LOC106608832 other upstream 103703 43389189 ~ 43390299 (+)
G1740312 r1441 other upstream 166264 43255653 ~ 43327738 (+)
G1740752 NA other downstream 718294 44212786 ~ 44213230 (+)
LOC110500528 tmem256 other downstream 952068 44446186 ~ 44451532 (+)
LOC110500529 LOC106608720 other downstream 966890 44461338 ~ 44480565 (+)
fcer1g LOC106608748 other downstream 1950035 45444361 ~ 45449712 (+)

Expression



Co-expression Network