G1740452


Basic Information

Item Value
gene id G1740452
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 43524205 ~ 43524465 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1993208
gtaccgtacCTATCattgcactcacacacactgacaagaaTGCCTGCACGGCACGCGCACCCACACACAAAATAACTTTAACTGAAAAATGCTGGTTTGGGCTGGTCCAACCTGATGAGAAACAACAGTCGTAAAcaaaggaaggagagaaaagagggagagagaaaaaagagaattACAGAGAGGAGTAAAAACACAGAGCATGGACTACAGACGGAgcagtcaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgtat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1993208 True 261 lncRNA 0.45 1 43524205 43524465

Neighbor

gene id symbol gene type direction distance location
LOC110500847 NA coding upstream 115163 43405498 ~ 43409042 (+)
LOC118942788 NA coding upstream 119458 43397554 ~ 43404747 (+)
LOC110500510 ccnb1ip1 coding upstream 139127 43382881 ~ 43385078 (+)
oxa1l LOC106608836 coding upstream 169768 43346414 ~ 43354437 (+)
LOC110500504 NA coding upstream 178426 43335680 ~ 43345779 (+)
LOC118942933 NA coding downstream 488388 44012853 ~ 44019901 (+)
LOC110500517 LOC106608821 coding downstream 515487 44039952 ~ 44050765 (+)
pop7 pop7 coding downstream 573472 44097937 ~ 44099926 (+)
LOC110500520 LOC106608811 coding downstream 601617 44126082 ~ 44154069 (+)
ufsp1 ufsp1 coding downstream 602209 44126674 ~ 44128053 (+)
G1740432 NA non-coding upstream 29713 43494002 ~ 43494492 (+)
G1740431 NA non-coding upstream 31090 43492798 ~ 43493115 (+)
G1740430 NA non-coding upstream 31546 43492403 ~ 43492659 (+)
G1740427 NA non-coding upstream 34412 43489578 ~ 43489793 (+)
G1740426 NA non-coding upstream 35670 43488302 ~ 43488535 (+)
G1740453 NA non-coding downstream 271 43524736 ~ 43526726 (+)
G1740457 NA non-coding downstream 9378 43533843 ~ 43534953 (+)
G1740507 NA non-coding downstream 112842 43637307 ~ 43637714 (+)
G1740647 NA non-coding downstream 391543 43916008 ~ 43916279 (+)
G1740649 NA non-coding downstream 392774 43917239 ~ 43917463 (+)
G1740412 LOC106608825 other upstream 53880 43469818 ~ 43470325 (+)
G1740398 NA other upstream 73038 43447050 ~ 43451167 (+)
G1740366 LOC106608832 other upstream 133906 43389189 ~ 43390299 (+)
G1740312 r1441 other upstream 196467 43255653 ~ 43327738 (+)
G1740752 NA other downstream 688321 44212786 ~ 44213230 (+)
LOC110500528 tmem256 other downstream 922095 44446186 ~ 44451532 (+)
LOC110500529 LOC106608720 other downstream 936917 44461338 ~ 44480565 (+)
fcer1g LOC106608748 other downstream 1920062 45444361 ~ 45449712 (+)

Expression


Co-expression Network