G1740649


Basic Information

Item Value
gene id G1740649
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 43917239 ~ 43917463 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1993422
gttaaagtacaaaaaggaaaGTAAATAACCATAAATATGGGTTGTCtttacaatgatgtttgttcttcactggttgaccttttcttgtgacaacaggtcacatatcttgctgctgtgatgcacactgtggtatttcacccagtagatatgggagtttatcaaaagtggatttgttttcgaaattctttgtggatctgtgtaatctgagggaaatatgtgtctcta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1993422 True 225 lncRNA 0.36 1 43917239 43917463

Neighbor

gene id symbol gene type direction distance location
LOC110500847 NA coding upstream 508197 43405498 ~ 43409042 (+)
LOC118942788 NA coding upstream 512492 43397554 ~ 43404747 (+)
LOC110500510 ccnb1ip1 coding upstream 532161 43382881 ~ 43385078 (+)
oxa1l LOC106608836 coding upstream 562802 43346414 ~ 43354437 (+)
LOC110500504 NA coding upstream 571460 43335680 ~ 43345779 (+)
LOC118942933 NA coding downstream 95390 44012853 ~ 44019901 (+)
LOC110500517 LOC106608821 coding downstream 122489 44039952 ~ 44050765 (+)
pop7 pop7 coding downstream 180474 44097937 ~ 44099926 (+)
LOC110500520 LOC106608811 coding downstream 208619 44126082 ~ 44154069 (+)
ufsp1 ufsp1 coding downstream 209211 44126674 ~ 44128053 (+)
G1740647 NA non-coding upstream 960 43916008 ~ 43916279 (+)
G1740507 NA non-coding upstream 279525 43637307 ~ 43637714 (+)
G1740457 NA non-coding upstream 382286 43533843 ~ 43534953 (+)
G1740453 NA non-coding upstream 390513 43524736 ~ 43526726 (+)
G1740452 NA non-coding upstream 392774 43524205 ~ 43524465 (+)
G1740697 NA non-coding downstream 122901 44040364 ~ 44040631 (+)
G1740698 NA non-coding downstream 123683 44041146 ~ 44041467 (+)
G1740699 NA non-coding downstream 125762 44043225 ~ 44043438 (+)
G1740731 NA non-coding downstream 242367 44159830 ~ 44160067 (+)
G1740412 LOC106608825 other upstream 446914 43469818 ~ 43470325 (+)
G1740398 NA other upstream 466072 43447050 ~ 43451167 (+)
G1740366 LOC106608832 other upstream 526940 43389189 ~ 43390299 (+)
LOC110500499 ubil other upstream 649096 43267057 ~ 43268143 (+)
G1740752 NA other downstream 295323 44212786 ~ 44213230 (+)
LOC110500528 tmem256 other downstream 529097 44446186 ~ 44451532 (+)
LOC110500529 LOC106608720 other downstream 543919 44461338 ~ 44480565 (+)
fcer1g LOC106608748 other downstream 1527064 45444361 ~ 45449712 (+)
LOC110500870 LOC106608752 other downstream 1567809 45485247 ~ 45517233 (+)

Expression


Co-expression Network