G1740697


Basic Information

Item Value
gene id G1740697
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 44040364 ~ 44040631 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1993476
CTTCTATATATGATGCTTAGATTGAACGCGCTGTGTATTTCGTTTTAGGCTAtcaaacaacatccacaacgaccATGTTTTCCACTTCGTTTCAACCTGTTGTTAAACAGTTTTTAAATTTGAataatcacagtgaggtgagttttaaaatcACGATACTGTTTTGAGGacaagtgtttgatgtgattttctattgcatttgcattgatgcaACATGCAGGGGGCACcttttggttttagaagtgttaGGGACATAACTTGGCGGGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1993476 True 268 lncRNA 0.38 1 44040364 44040631

Neighbor

gene id symbol gene type direction distance location
LOC118942933 NA coding upstream 20463 44012853 ~ 44019901 (+)
LOC110500847 NA coding upstream 631322 43405498 ~ 43409042 (+)
LOC118942788 NA coding upstream 635617 43397554 ~ 43404747 (+)
LOC110500510 ccnb1ip1 coding upstream 655286 43382881 ~ 43385078 (+)
oxa1l LOC106608836 coding upstream 685927 43346414 ~ 43354437 (+)
pop7 pop7 coding downstream 57306 44097937 ~ 44099926 (+)
LOC110500520 LOC106608811 coding downstream 85451 44126082 ~ 44154069 (+)
ufsp1 ufsp1 coding downstream 86043 44126674 ~ 44128053 (+)
LOC110500528 tmem256 coding downstream 405555 44446186 ~ 44451532 (+)
LOC110500529 LOC106608720 coding downstream 420707 44461338 ~ 44480565 (+)
G1740649 NA non-coding upstream 122901 43917239 ~ 43917463 (+)
G1740647 NA non-coding upstream 124085 43916008 ~ 43916279 (+)
G1740507 NA non-coding upstream 402650 43637307 ~ 43637714 (+)
G1740457 NA non-coding upstream 505411 43533843 ~ 43534953 (+)
G1740453 NA non-coding upstream 513638 43524736 ~ 43526726 (+)
G1740698 NA non-coding downstream 515 44041146 ~ 44041467 (+)
G1740699 NA non-coding downstream 2594 44043225 ~ 44043438 (+)
LOC110500517 LOC106608821 non-coding downstream 4997 44039952 ~ 44050765 (+)
G1740731 NA non-coding downstream 119199 44159830 ~ 44160067 (+)
G1740735 NA non-coding downstream 130200 44170831 ~ 44171265 (+)
G1740412 LOC106608825 other upstream 570039 43469818 ~ 43470325 (+)
G1740398 NA other upstream 589197 43447050 ~ 43451167 (+)
G1740366 LOC106608832 other upstream 650065 43389189 ~ 43390299 (+)
LOC110500499 ubil other upstream 772221 43267057 ~ 43268143 (+)
G1740752 NA other downstream 172155 44212786 ~ 44213230 (+)
fcer1g LOC106608748 other downstream 1403896 45444361 ~ 45449712 (+)
LOC110500870 LOC106608752 other downstream 1444641 45485247 ~ 45517233 (+)

Expression


Co-expression Network