G1740698


Basic Information

Item Value
gene id G1740698
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 44041146 ~ 44041467 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1993477
tgtcttttggatgggacattAAACATGACTCTCTGAGAGCAttgaagatcccatggcacttgtgTTAACCCCGgtatcctggctaaattcccaatctgtcccttaaaccatcatggtcacctaataattcccaccttacaattggctcattcatcccctgtaactattccccaggtcgttgctgtaaatgagaacgtgttctcagtcaacttacctggtaaaataacagaacaataaaataaatatagtatGTGGTCTTACACTGCAGTTATTTATGTTTGAgattatatgaacatgactgggcattctaACATCTCTATCC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1993477 True 322 lncRNA 0.39 1 44041146 44041467

Neighbor

gene id symbol gene type direction distance location
LOC118942933 NA coding upstream 21245 44012853 ~ 44019901 (+)
LOC110500847 NA coding upstream 632104 43405498 ~ 43409042 (+)
LOC118942788 NA coding upstream 636399 43397554 ~ 43404747 (+)
LOC110500510 ccnb1ip1 coding upstream 656068 43382881 ~ 43385078 (+)
oxa1l LOC106608836 coding upstream 686709 43346414 ~ 43354437 (+)
pop7 pop7 coding downstream 56470 44097937 ~ 44099926 (+)
LOC110500520 LOC106608811 coding downstream 84615 44126082 ~ 44154069 (+)
ufsp1 ufsp1 coding downstream 85207 44126674 ~ 44128053 (+)
LOC110500528 tmem256 coding downstream 404719 44446186 ~ 44451532 (+)
LOC110500529 LOC106608720 coding downstream 419871 44461338 ~ 44480565 (+)
G1740697 NA non-coding upstream 515 44040364 ~ 44040631 (+)
G1740649 NA non-coding upstream 123683 43917239 ~ 43917463 (+)
G1740647 NA non-coding upstream 124867 43916008 ~ 43916279 (+)
G1740507 NA non-coding upstream 403432 43637307 ~ 43637714 (+)
G1740457 NA non-coding upstream 506193 43533843 ~ 43534953 (+)
G1740699 NA non-coding downstream 1758 44043225 ~ 44043438 (+)
LOC110500517 LOC106608821 non-coding downstream 4161 44039952 ~ 44050765 (+)
G1740731 NA non-coding downstream 118363 44159830 ~ 44160067 (+)
G1740735 NA non-coding downstream 129364 44170831 ~ 44171265 (+)
G1740736 NA non-coding downstream 131542 44173009 ~ 44173251 (+)
G1740453 NA other upstream 514420 43524736 ~ 43526726 (+)
G1740412 LOC106608825 other upstream 570821 43469818 ~ 43470325 (+)
G1740398 NA other upstream 589979 43447050 ~ 43451167 (+)
G1740366 LOC106608832 other upstream 650847 43389189 ~ 43390299 (+)
LOC110500499 ubil other upstream 773003 43267057 ~ 43268143 (+)
G1740752 NA other downstream 171319 44212786 ~ 44213230 (+)
fcer1g LOC106608748 other downstream 1403060 45444361 ~ 45449712 (+)
LOC110500870 LOC106608752 other downstream 1443805 45485247 ~ 45517233 (+)

Expression


Co-expression Network