G1741446


Basic Information

Item Value
gene id G1741446
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 44175184 ~ 44177702 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1994344
aCAGGTTGGTGTTGTCAGATACTCTGTGTTGGCCaactgagagagacagtgtgtggtgGGGAAACACAGGAGATGATCCGCTGTACAATATACTGTAACAAGGACCAGACTGGGGTTGTTTATGTGGAATCAGAGGGAGTCAGTGGACTTATATGCTGGAACTTTTCTCTCCGCTACAGAGATGGATTTACTATAAAATGTGCTATTGGACTAGAATATGAAACCTGGGAGAGAGCCCCAAAGCCTCCAAGTCATCATCACAGCCTTAAACAAAGGGGAAAGGGTGTGAGATGTGACCGGGACAGTGGACAGACTAGGGCACCGACATCTTATTTCAGGTGTGGGAATGATCAGATTCATCTGTCCTATCAAGTCTTTGTGCCATTAGATCCTGAACTTTTTTATCCTGTGAATAAGAGGGCAACGGGAGAGTCGCAGAGGAAACTAGTACTACTACaaatacaacacaacaaaacTTCAACCAATCGAAGAGTGACAGATGCGATTTCCTTTGTTTCCTGTTCTTTTCCTTGTCTATTTTATACGCTTACACACTAGAGGGCGCCATGGAGACACAATCGCCATAACAACCTACTGTTCCTCTGAACATTCTGAACGTGGAGGAATTCAGCGTTTTGCGACAGAGAGAGACGTCAAAAAAAGAGGagcaaaactgtacatttttaaGTGTAAGAACAAACAGTCAAAAATATTTGTAAATattacgtttcttgttttgtttttttcgagTGAATGAATGAAATGACTTTGTGACGACAACAGAGACAACAGGTGCAAGTTGAAAAGGGGTCTCCAGCTAGTATTGTATGTTAACCGTACGCCATTTAAATGTATTCGCCACGGAACTTTTCCGAGAGATTCAGGAAAGTGGGATTCTCGTTCTGTCAGCTCTTTCCGTGCATGTCACTAACAAAGTTGTTCAGAAGTGGATAGACAATGGACATTCAGAACAAAGTCATCATGTGTTGTCTACGTAGCATCTTGACTACTCAACCTGTGTAAGCACTAAGCGAACACCGTAGCAGGGATACTGACCCATTCTCATTCTCTGCTGTTGGTTATAGGGTCTCTCCCACGTTCAAAATGGGCCCTGCATAACTGCAGGCCTGTATTAGCTGTGTACCACACCAGCCATACTGGATGATGATACAGCACACCTTAAAGGTGGAATCGGTCACTTCCACCACCCATGTGGCAACGACAAACATGGCCAAGAAGCAAAAAATTTAATCAAATGAATGCACCTTTAAAAACATCCTTGTGGCTTTTGGAATGTGTATATTTCCAACCCTGTTGACTCTCCCACCGTTGTGTAGCCCCGGAACCACAGGGAGACCGAGAAACGATGGCTTTTTGTAACCTAAGTTGCCTCTGATCTAGCCTATTCCCAGATCGGTTTGTgccgtcttgccaactcctacggTCATTGTCGCGACCAGGAGTTGACAagacggcacaaacagatctgggaccaggctacgtCTTAGCCTTATCGGGAATCACGTACTGCGGGTGGGACACATGTCCCCCTGAATACACTGTGTTACGTACAATATGTGTCCTGTTCATGTAGGTTGTGCTACCTGTATACAGTGACCTCATCATAAGCTATCGGTACCGCTAAGCTTGCCTTCCAAGTGGAACGGTGAGGTGGGAATTGAGCTGCTTAGTGGGCAGATGGTTGAACTGCATGACAAGGCATGTACATAGGTACAGACCAGGAAGTGTGAGTGTGTACATGTGAGAGTATGTGTTAGGATAGCTCATTTGGTGTGTAAGCATAGGTGTGTACTCCATTTTGTTGTAGCATTAGTTAGGACTAATGCAGAGGGAGTTGATATCTATTGTGTTAGTTTAGTAGGACTTTAAAACGATTGACacgacccccccaaaaaaatccatATTGGATTTTAATGTATTATCTCCCGCACATAAAGAAAGTCATACTTTTTGGTGCAAAACCAATTTTGTTAAGTGTTCAATGATTAACACCATCTGTTGTTATGAAGCAGCTAACACTGTTTTATAGATTTGCCAGAGTGATGCTCTGTTAAACACCTGTCCTGAACTAAAGAGGTAGACCGTAACAATGTTTCATGTAGGTGAATTTCCTGCCTTGCTCGTGACCACATGTCATGGTTGACCTTCAAAACAGAGAAAGGTTCGTCTATGTTAAGGTCAAGGCACCTGAGAGACCAGTTGTACTGAAGCACATGACAAATAACCCTGGGAAACATTCTGAGCTGGGTGTCAGTTCGGGCCTGCATAGTCAAATTTGCACCTGTTgtcttgtttttattttctttgtAGAATTCCGAAACCCAAGACTTGAGATGACGAAAACATGTTAATAATGGATTTTAAAAACATATTATAATTCAAAAAAATGAAAGTAAAACTATATAAATAAGGTGATGATATTTGTTTACTTTAGAAGTTATGATACACTGTGTGCTGGGATTCTGATGTGGGGAACATTAAAGACATTCATAGCCAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1994344 True 2519 TUCP 0.43 1 44175184 44177702

Neighbor

gene id symbol gene type direction distance location
LOC110500526 LOC106608810 coding downstream 4402 44161273 ~ 44170782 (-)
LOC110500524 LOC106608815 coding downstream 26110 44141856 ~ 44149074 (-)
LOC110500521 LOC106608813 coding downstream 28000 44145135 ~ 44147184 (-)
si:dkey-85k7.10 LOC106608812 coding downstream 38659 44134553 ~ 44136525 (-)
epoa epo coding downstream 63415 44101106 ~ 44111769 (-)
LOC110500852 LOC105020576 coding upstream 1656 44177842 ~ 44390292 (-)
trnae-uuc-60 NA coding upstream 195638 44373340 ~ 44373415 (-)
LOC110500853 NA coding upstream 274781 44452483 ~ 44453213 (-)
LOC110500534 NA coding upstream 569064 44746675 ~ 44749563 (-)
LOC118942804 NA coding upstream 620348 44798050 ~ 44805963 (-)
G1741445 NA non-coding downstream 3393 44171468 ~ 44171791 (-)
G1741425 ufsp1 non-coding downstream 47076 44126938 ~ 44128108 (-)
G1741416 NA non-coding downstream 54469 44120149 ~ 44120715 (-)
G1741411 NA non-coding downstream 89753 44079445 ~ 44085431 (-)
LOC110500515 gigyf1 non-coding downstream 117535 44047717 ~ 44097779 (-)
G1741448 NA non-coding upstream 15539 44193241 ~ 44193447 (-)
G1741449 NA non-coding upstream 17353 44195055 ~ 44195416 (-)
G1741452 NA non-coding upstream 23088 44200790 ~ 44201069 (-)
G1741459 NA non-coding upstream 32309 44210011 ~ 44210252 (-)
dnah2 dnah2 other downstream 550650 43623631 ~ 43841205 (-)
G1741207 NA other downstream 670330 43503343 ~ 43504854 (-)
LOC110500511 tmem88 other downstream 718925 43447034 ~ 43456466 (-)
G1741082 LOC106608843 other downstream 931151 43242280 ~ 43244033 (-)
G1742473 LOC106608730 other upstream 686714 44864416 ~ 44868643 (-)
G1742845 dock11 other upstream 1110089 45287791 ~ 45294739 (-)
LOC110500574 LOC106608762 other upstream 1552613 45703162 ~ 45734292 (-)
G1743429 LOC105030512 other upstream 1593120 45770822 ~ 45772431 (-)
LOC110500942 NA other upstream 1632711 45809435 ~ 45813290 (-)

Expression


Co-expression Network