Gene
RNA
| Item | Value |
|---|---|
| gene id | G1740739 |
| gene name | LOC106533889 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 44189979 ~ 44190321 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: neuroligin-4, Y-linked-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1993540 | True | 343 | lncRNA | 0.57 | 1 | 44189979 | 44190321 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500520 | LOC106608811 | coding | upstream | 35910 | 44126082 ~ 44154069 (+) |
| ufsp1 | ufsp1 | coding | upstream | 61926 | 44126674 ~ 44128053 (+) |
| pop7 | pop7 | coding | upstream | 90053 | 44097937 ~ 44099926 (+) |
| LOC110500517 | LOC106608821 | coding | upstream | 140391 | 44039952 ~ 44050765 (+) |
| LOC118942933 | NA | coding | upstream | 170078 | 44012853 ~ 44019901 (+) |
| LOC110500528 | tmem256 | coding | downstream | 255865 | 44446186 ~ 44451532 (+) |
| LOC110500529 | LOC106608720 | coding | downstream | 271017 | 44461338 ~ 44480565 (+) |
| LOC110500530 | NA | coding | downstream | 347623 | 44537944 ~ 44556711 (+) |
| LOC110500854 | LOC106608721 | coding | downstream | 410542 | 44600863 ~ 44667561 (+) |
| chrnb1 | LOC106608722 | coding | downstream | 489344 | 44679665 ~ 44703721 (+) |
| G1740738 | LOC106608803 | non-coding | upstream | 8353 | 44175192 ~ 44181626 (+) |
| G1740736 | NA | non-coding | upstream | 16728 | 44173009 ~ 44173251 (+) |
| G1740735 | NA | non-coding | upstream | 18714 | 44170831 ~ 44171265 (+) |
| G1740731 | NA | non-coding | upstream | 29912 | 44159830 ~ 44160067 (+) |
| G1740740 | LOC106577771 | non-coding | downstream | 1126 | 44191447 ~ 44191706 (+) |
| G1740741 | NA | non-coding | downstream | 1595 | 44191916 ~ 44192266 (+) |
| G1740742 | NA | non-coding | downstream | 3071 | 44193392 ~ 44193724 (+) |
| G1740743 | NA | non-coding | downstream | 6093 | 44196414 ~ 44196901 (+) |
| G1740744 | nlgn2 | non-coding | downstream | 6663 | 44196984 ~ 44197566 (+) |
| G1740453 | NA | other | upstream | 663253 | 43524736 ~ 43526726 (+) |
| G1740412 | LOC106608825 | other | upstream | 719654 | 43469818 ~ 43470325 (+) |
| G1740398 | NA | other | upstream | 738812 | 43447050 ~ 43451167 (+) |
| G1740366 | LOC106608832 | other | upstream | 799680 | 43389189 ~ 43390299 (+) |
| LOC110500499 | ubil | other | upstream | 921836 | 43267057 ~ 43268143 (+) |
| G1740752 | NA | other | downstream | 22465 | 44212786 ~ 44213230 (+) |
| fcer1g | LOC106608748 | other | downstream | 1254206 | 45444361 ~ 45449712 (+) |
| LOC110500870 | LOC106608752 | other | downstream | 1294951 | 45485247 ~ 45517233 (+) |
