G1740741


Basic Information

Item Value
gene id G1740741
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 44191916 ~ 44192266 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1993542
gtctaacgTGGAATCCTCTCATTGCCTCCTTTCTCTCCGGGAAGAGAGAAGTTAATACTGTTCTTTGAACAATCTGAAAAGTTCAGACTTGGGGAAGGGATTGAGAATACTTAGGTTGTGAAAGTTTGTTCCTTTTACCCTCCACAGATTTGTCTTTGCTTTTCCCTACATCTTACTCACTGTAACAAATCAGAGAGAAAGGCATGTGCTTCTAACTCCAACAATCTCAGACTTGGGAAATCGATGGGGGACTACACAGTCTGCTTCTAAAAGAGACTTTTCCTTCCTATCTTCCacagatttctctctctctctctctctctctctctctctctctcgctctctctcttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1993542 True 351 lncRNA 0.42 1 44191916 44192266

Neighbor

gene id symbol gene type direction distance location
LOC110500520 LOC106608811 coding upstream 37847 44126082 ~ 44154069 (+)
ufsp1 ufsp1 coding upstream 63863 44126674 ~ 44128053 (+)
pop7 pop7 coding upstream 91990 44097937 ~ 44099926 (+)
LOC110500517 LOC106608821 coding upstream 142328 44039952 ~ 44050765 (+)
LOC118942933 NA coding upstream 172015 44012853 ~ 44019901 (+)
LOC110500528 tmem256 coding downstream 253920 44446186 ~ 44451532 (+)
LOC110500529 LOC106608720 coding downstream 269072 44461338 ~ 44480565 (+)
LOC110500530 NA coding downstream 345678 44537944 ~ 44556711 (+)
LOC110500854 LOC106608721 coding downstream 408597 44600863 ~ 44667561 (+)
chrnb1 LOC106608722 coding downstream 487399 44679665 ~ 44703721 (+)
G1740740 LOC106577771 non-coding upstream 210 44191447 ~ 44191706 (+)
G1740739 LOC106533889 non-coding upstream 1595 44189979 ~ 44190321 (+)
G1740738 LOC106608803 non-coding upstream 10290 44175192 ~ 44181626 (+)
G1740736 NA non-coding upstream 18665 44173009 ~ 44173251 (+)
G1740735 NA non-coding upstream 20651 44170831 ~ 44171265 (+)
G1740742 NA non-coding downstream 1126 44193392 ~ 44193724 (+)
G1740743 NA non-coding downstream 4148 44196414 ~ 44196901 (+)
G1740744 nlgn2 non-coding downstream 4718 44196984 ~ 44197566 (+)
G1740750 NA non-coding downstream 15378 44207644 ~ 44207944 (+)
G1740844 NA non-coding downstream 194426 44386692 ~ 44386905 (+)
G1740453 NA other upstream 665190 43524736 ~ 43526726 (+)
G1740412 LOC106608825 other upstream 721591 43469818 ~ 43470325 (+)
G1740398 NA other upstream 740749 43447050 ~ 43451167 (+)
G1740366 LOC106608832 other upstream 801617 43389189 ~ 43390299 (+)
LOC110500499 ubil other upstream 923773 43267057 ~ 43268143 (+)
G1740752 NA other downstream 20520 44212786 ~ 44213230 (+)
fcer1g LOC106608748 other downstream 1252261 45444361 ~ 45449712 (+)
LOC110500870 LOC106608752 other downstream 1293006 45485247 ~ 45517233 (+)

Expression


Co-expression Network