G1740742


Basic Information

Item Value
gene id G1740742
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 44193392 ~ 44193724 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1993543
atcagaccagagaatcttgtttgtcatgatctgagagtctttaggtgccttttggcaaactccaagcgggctgtcatgtgccttttactgaagagtggcttcaatctggccactctaccataaaggcctgattggtggagtgcagcatggttgtccttctggaaggttctcccatctccacaggggaactctggagctctgtcagagtgaccatcgggttcttggtcacctccctgaccaagacccttctcccccgattgctcagtttggccgggcggccagctctaggaagagtcttggtggttccaaacttcttctatttaagaatgatgg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1993543 True 333 lncRNA 0.51 1 44193392 44193724

Neighbor

gene id symbol gene type direction distance location
LOC110500520 LOC106608811 coding upstream 39323 44126082 ~ 44154069 (+)
ufsp1 ufsp1 coding upstream 65339 44126674 ~ 44128053 (+)
pop7 pop7 coding upstream 93466 44097937 ~ 44099926 (+)
LOC110500517 LOC106608821 coding upstream 143804 44039952 ~ 44050765 (+)
LOC118942933 NA coding upstream 173491 44012853 ~ 44019901 (+)
LOC110500528 tmem256 coding downstream 252462 44446186 ~ 44451532 (+)
LOC110500529 LOC106608720 coding downstream 267614 44461338 ~ 44480565 (+)
LOC110500530 NA coding downstream 344220 44537944 ~ 44556711 (+)
LOC110500854 LOC106608721 coding downstream 407139 44600863 ~ 44667561 (+)
chrnb1 LOC106608722 coding downstream 485941 44679665 ~ 44703721 (+)
G1740741 NA non-coding upstream 1126 44191916 ~ 44192266 (+)
G1740740 LOC106577771 non-coding upstream 1686 44191447 ~ 44191706 (+)
G1740739 LOC106533889 non-coding upstream 3071 44189979 ~ 44190321 (+)
G1740738 LOC106608803 non-coding upstream 11766 44175192 ~ 44181626 (+)
G1740736 NA non-coding upstream 20141 44173009 ~ 44173251 (+)
G1740743 NA non-coding downstream 2690 44196414 ~ 44196901 (+)
G1740744 nlgn2 non-coding downstream 3260 44196984 ~ 44197566 (+)
G1740750 NA non-coding downstream 13920 44207644 ~ 44207944 (+)
G1740844 NA non-coding downstream 192968 44386692 ~ 44386905 (+)
G1740847 NA non-coding downstream 195448 44389172 ~ 44390435 (+)
G1740453 NA other upstream 666666 43524736 ~ 43526726 (+)
G1740412 LOC106608825 other upstream 723067 43469818 ~ 43470325 (+)
G1740398 NA other upstream 742225 43447050 ~ 43451167 (+)
G1740366 LOC106608832 other upstream 803093 43389189 ~ 43390299 (+)
LOC110500499 ubil other upstream 925249 43267057 ~ 43268143 (+)
G1740752 NA other downstream 19062 44212786 ~ 44213230 (+)
fcer1g LOC106608748 other downstream 1250803 45444361 ~ 45449712 (+)
LOC110500870 LOC106608752 other downstream 1291548 45485247 ~ 45517233 (+)

Expression


Co-expression Network