G1741653


Basic Information

Item Value
gene id G1741653
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 44458606 ~ 44458893 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1994556
CTGCAGTGGAGCCTGTGTTGTCACTTTGTCTACTAAAAGCAGAGGGCTGGCTCAGGCTCCATCTCGCCCCCTTGTTCTGCAGAGGAGCCTGTGTTGTCACTTTGTCCACTAAAAGCAGAGGGCTGGCTCAGGCTCCATCTCGCCCCCTTGTTCTGCAGAGGAGCCTGTGTTGTCACTTTGTCTACTAAAAGCAGAGGGCTGGCTCAGGCTCCATCTCACCCCCTTGTTCTGCAGAGGAGTTTAGAGGATGCAAGCAAAAGCTTCACAATCATGATTGTCCCAATGTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1994556 True 288 lncRNA 0.53 1 44458606 44458893

Neighbor

gene id symbol gene type direction distance location
LOC110500528 tmem256 coding upstream 7074 44446186 ~ 44451532 (+)
LOC110500520 LOC106608811 coding upstream 304537 44126082 ~ 44154069 (+)
ufsp1 ufsp1 coding upstream 330553 44126674 ~ 44128053 (+)
pop7 pop7 coding upstream 358680 44097937 ~ 44099926 (+)
LOC110500517 LOC106608821 coding upstream 409018 44039952 ~ 44050765 (+)
LOC110500529 LOC106608720 coding downstream 2445 44461338 ~ 44480565 (+)
LOC110500530 NA coding downstream 79051 44537944 ~ 44556711 (+)
LOC110500854 LOC106608721 coding downstream 141970 44600863 ~ 44667561 (+)
chrnb1 LOC106608722 coding downstream 220772 44679665 ~ 44703721 (+)
LOC110500532 LOC106608724 coding downstream 268307 44727200 ~ 44746630 (+)
G1741587 NA non-coding upstream 53178 44405226 ~ 44405428 (+)
G1741581 NA non-coding upstream 57010 44401359 ~ 44401596 (+)
G1740847 NA non-coding upstream 68171 44389172 ~ 44390435 (+)
G1740844 NA non-coding upstream 71701 44386692 ~ 44386905 (+)
G1740750 NA non-coding upstream 250662 44207644 ~ 44207944 (+)
G1741666 NA non-coding downstream 16510 44475403 ~ 44475629 (+)
G1741670 NA non-coding downstream 29637 44488530 ~ 44488758 (+)
G1741712 NA non-coding downstream 215114 44674007 ~ 44675297 (+)
G1741965 NA non-coding downstream 260646 44719539 ~ 44719756 (+)
G1740752 NA other upstream 245376 44212786 ~ 44213230 (+)
G1740453 NA other upstream 931880 43524736 ~ 43526726 (+)
G1740412 LOC106608825 other upstream 988281 43469818 ~ 43470325 (+)
G1740398 NA other upstream 1007439 43447050 ~ 43451167 (+)
fcer1g LOC106608748 other downstream 985634 45444361 ~ 45449712 (+)
LOC110500870 LOC106608752 other downstream 1026379 45485247 ~ 45517233 (+)
si:dkey-38p12.3 LOC106608755 other downstream 1090224 45544516 ~ 45565742 (+)
G1743043 NA other downstream 1180403 45639296 ~ 45639742 (+)

Expression


Co-expression Network