G1742371


Basic Information

Item Value
gene id G1742371
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 45422297 ~ 45426947 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1995324
gaactgggattcctgggagtgcattccgatgaagatcatcaaaggtaagtgaatatttacgctatttctgacttttgtgacacctctccttctttggaaaatggctgtatgtttttctgtggctaggcgctgacctaacataatcgcaaggtgtgctttcgccgtaaagcctttttgaaatctgacacaccgGTTGCATTAAGGGGAAgtttatctataattccatgcataacac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1995324 True 235 lncRNA 0.42 2 45422297 45426947

Neighbor

gene id symbol gene type direction distance location
kirrel1a LOC106608745 coding upstream 3124 45379310 ~ 45419173 (+)
trnar-ucu-9 NA coding upstream 44215 45378009 ~ 45378082 (+)
il13ra1 i13r2 coding upstream 54085 45359504 ~ 45368212 (+)
dock11 dock11 coding upstream 63005 45247575 ~ 45359292 (+)
LOC118942935 LOC106608740 coding upstream 347861 45073787 ~ 45074436 (+)
ndufs2 ndufs2 coding downstream 5633 45432580 ~ 45444197 (+)
fcer1g LOC106608748 coding downstream 17414 45444361 ~ 45449712 (+)
nectin4a LOC106608750 coding downstream 28712 45455659 ~ 45474914 (+)
LOC110500870 LOC106608752 coding downstream 58300 45485247 ~ 45517233 (+)
si:dkey-38p12.3 LOC106608755 coding downstream 117569 45544516 ~ 45565742 (+)
G1742308 NA non-coding upstream 158683 45263230 ~ 45263614 (+)
G1742298 NA non-coding upstream 178121 45230536 ~ 45244176 (+)
G1742167 NA non-coding upstream 376652 45042866 ~ 45045645 (+)
G1742156 NA non-coding upstream 393649 45026746 ~ 45028648 (+)
G1742379 NA non-coding downstream 53528 45480475 ~ 45521688 (+)
G1742416 NA non-coding downstream 95180 45522127 ~ 45522440 (+)
G1742381 NA non-coding downstream 98430 45525377 ~ 45525723 (+)
G1742383 NA non-coding downstream 99405 45526352 ~ 45526612 (+)
G1742420 NA non-coding downstream 107014 45533961 ~ 45534179 (+)
LOC110500529 LOC106608720 other upstream 949733 44461338 ~ 44480565 (+)
LOC110500528 tmem256 other upstream 970765 44446186 ~ 44451532 (+)
G1740752 NA other upstream 1209067 44212786 ~ 44213230 (+)
G1740453 NA other upstream 1895571 43524736 ~ 43526726 (+)
G1740412 LOC106608825 other upstream 1951972 43469818 ~ 43470325 (+)
G1743043 NA other downstream 212349 45639296 ~ 45639742 (+)
G1743077 NA other downstream 280195 45707142 ~ 45709950 (+)

Expression


Co-expression Network