G1742425


Basic Information

Item Value
gene id G1742425
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 45537063 ~ 45537424 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1995385
CCCTTGGGGTCACCCTCGATCCGGACCAGGCCGCTTCGATCCGGCTCCTGTGGGATCCACACCGACACCTTGTACTGCTCTTTAATCCGGTTAACTGAAAAACACAGCATGGGATTTACATGGCTATATattagaaagagtgtgtgtgtgtgtgcgtttgtgcgtgtgtgtgtgtactcactgttGGCTCCGTTCTTGCCGATGAGGTGTCTGTGAAAGCGCTGGTCTATGTTGACGTCAGTGTAGTCCATCCTCACCAGCTTAACACCAGGAAACAGGGTTTACATGTTAGAGTAGACGGCCTGGTTCCTTGCAAGATGTCCTCATATCTAGGGAGTTTCTGTACGTTGGTGGGTTAGGAC

Function

NR:

description
vigilin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1995385 True 362 lncRNA 0.51 1 45537063 45537424

Neighbor

gene id symbol gene type direction distance location
LOC110500870 LOC106608752 coding upstream 19830 45485247 ~ 45517233 (+)
nectin4a LOC106608750 coding upstream 62149 45455659 ~ 45474914 (+)
fcer1g LOC106608748 coding upstream 87351 45444361 ~ 45449712 (+)
ndufs2 ndufs2 coding upstream 92866 45432580 ~ 45444197 (+)
kirrel1a LOC106608745 coding upstream 117890 45379310 ~ 45419173 (+)
si:dkey-38p12.3 LOC106608755 coding downstream 7092 45544516 ~ 45565742 (+)
si:dkey-19b23.7 LOC106608757 coding downstream 105437 45642861 ~ 45648249 (+)
LOC110500572 LOC106608759 coding downstream 140237 45677661 ~ 45686049 (+)
LOC110500573 LOC106608761 coding downstream 151026 45688450 ~ 45702662 (+)
LOC110500577 lsmd1 coding downstream 207186 45744610 ~ 45755368 (+)
G1742424 NA non-coding upstream 71 45536754 ~ 45536992 (+)
G1742423 LOC106608754 non-coding upstream 1161 45535628 ~ 45535902 (+)
G1742422 LOC106608754 non-coding upstream 1614 45535112 ~ 45535449 (+)
G1742421 LOC106608754 non-coding upstream 2155 45534692 ~ 45534908 (+)
G1742420 NA non-coding upstream 2884 45533961 ~ 45534179 (+)
G1742426 NA non-coding downstream 982 45538406 ~ 45538720 (+)
G1742427 LOC106608754 non-coding downstream 1742 45539166 ~ 45539573 (+)
G1742428 NA non-coding downstream 3005 45540429 ~ 45540639 (+)
G1743002 NA non-coding downstream 41884 45579308 ~ 45606291 (+)
G1743003 NA non-coding downstream 42991 45580415 ~ 45606695 (+)
LOC110500529 LOC106608720 other upstream 1064499 44461338 ~ 44480565 (+)
LOC110500528 tmem256 other upstream 1085531 44446186 ~ 44451532 (+)
G1740752 NA other upstream 1323833 44212786 ~ 44213230 (+)
G1743043 NA other downstream 101872 45639296 ~ 45639742 (+)
G1743077 NA other downstream 169718 45707142 ~ 45709950 (+)
G1744645 NA other downstream 1626480 47163904 ~ 47236823 (+)
G1746210 NA other downstream 2557343 48094767 ~ 48095119 (+)

Expression


Co-expression Network