G1742426


Basic Information

Item Value
gene id G1742426
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 45538406 ~ 45538720 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1995386
TGGCGTAGACCTGTGTGAGTGCAGGGCCCAGCTTGTCCGGCTCGCCCCTCAGGATGATGGTCTCCGAGCAGGAGTCCAGCGGGGGCATCTCCACAGAAACCCCGGTGGTCTCCATGATCTCATGCAGGCTGTTGCCTTTAGGCCCCACAATGTACTTGTGCTGCGACTTCTTCACCTCCACTGAGATGGTGGTGGTCTTTCTCTTCTGGAGGACGTGGGGAAggtgaggaagggggaggaagaggaagaggaaaggggaggggtgacagaggggaaaggaaagaggcagacaaaaaaagacaaagtgtgcatgag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1995386 True 315 lncRNA 0.57 1 45538406 45538720

Neighbor

gene id symbol gene type direction distance location
LOC110500870 LOC106608752 coding upstream 21173 45485247 ~ 45517233 (+)
nectin4a LOC106608750 coding upstream 63492 45455659 ~ 45474914 (+)
fcer1g LOC106608748 coding upstream 88694 45444361 ~ 45449712 (+)
ndufs2 ndufs2 coding upstream 94209 45432580 ~ 45444197 (+)
kirrel1a LOC106608745 coding upstream 119233 45379310 ~ 45419173 (+)
si:dkey-38p12.3 LOC106608755 coding downstream 5796 45544516 ~ 45565742 (+)
si:dkey-19b23.7 LOC106608757 coding downstream 104141 45642861 ~ 45648249 (+)
LOC110500572 LOC106608759 coding downstream 138941 45677661 ~ 45686049 (+)
LOC110500573 LOC106608761 coding downstream 149730 45688450 ~ 45702662 (+)
LOC110500577 lsmd1 coding downstream 205890 45744610 ~ 45755368 (+)
G1742425 NA non-coding upstream 982 45537063 ~ 45537424 (+)
G1742424 NA non-coding upstream 1414 45536754 ~ 45536992 (+)
G1742423 LOC106608754 non-coding upstream 2504 45535628 ~ 45535902 (+)
G1742422 LOC106608754 non-coding upstream 2957 45535112 ~ 45535449 (+)
G1742421 LOC106608754 non-coding upstream 3498 45534692 ~ 45534908 (+)
G1742427 LOC106608754 non-coding downstream 446 45539166 ~ 45539573 (+)
G1742428 NA non-coding downstream 1709 45540429 ~ 45540639 (+)
G1743002 NA non-coding downstream 40588 45579308 ~ 45606291 (+)
G1743003 NA non-coding downstream 41695 45580415 ~ 45606695 (+)
G1743004 NA non-coding downstream 42179 45580899 ~ 45626721 (+)
LOC110500529 LOC106608720 other upstream 1065842 44461338 ~ 44480565 (+)
LOC110500528 tmem256 other upstream 1086874 44446186 ~ 44451532 (+)
G1740752 NA other upstream 1325176 44212786 ~ 44213230 (+)
G1743043 NA other downstream 100576 45639296 ~ 45639742 (+)
G1743077 NA other downstream 168422 45707142 ~ 45709950 (+)
G1744645 NA other downstream 1625184 47163904 ~ 47236823 (+)
G1746210 NA other downstream 2556047 48094767 ~ 48095119 (+)

Expression


Co-expression Network