G1742428


Basic Information

Item Value
gene id G1742428
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 45540429 ~ 45540639 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1995388
CCTGTGTCTGCAGCCGAGACACGATCTCCTTACGGGCCTTCATGACAGAGTCCAGTTTCCCAGTGACCATGATGGAGAGGCCCTGGTCCTTGGCCAGCGACAGCTCGATGTGAGCCCCCGTCCTCTGCATGATGTCCAGGCACACCTTGGCCTCCTCGCCCCCGTCACCAAACTGGCTGTTGTCCTTGTAGCGCCGCTCCTCCAGGGGCAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1995388 True 211 lncRNA 0.62 1 45540429 45540639

Neighbor

gene id symbol gene type direction distance location
LOC110500870 LOC106608752 coding upstream 23196 45485247 ~ 45517233 (+)
nectin4a LOC106608750 coding upstream 65515 45455659 ~ 45474914 (+)
fcer1g LOC106608748 coding upstream 90717 45444361 ~ 45449712 (+)
ndufs2 ndufs2 coding upstream 96232 45432580 ~ 45444197 (+)
kirrel1a LOC106608745 coding upstream 121256 45379310 ~ 45419173 (+)
si:dkey-38p12.3 LOC106608755 coding downstream 3877 45544516 ~ 45565742 (+)
si:dkey-19b23.7 LOC106608757 coding downstream 102222 45642861 ~ 45648249 (+)
LOC110500572 LOC106608759 coding downstream 137022 45677661 ~ 45686049 (+)
LOC110500573 LOC106608761 coding downstream 147811 45688450 ~ 45702662 (+)
LOC110500577 lsmd1 coding downstream 203971 45744610 ~ 45755368 (+)
G1742427 LOC106608754 non-coding upstream 856 45539166 ~ 45539573 (+)
G1742426 NA non-coding upstream 1709 45538406 ~ 45538720 (+)
G1742425 NA non-coding upstream 3005 45537063 ~ 45537424 (+)
G1742424 NA non-coding upstream 3437 45536754 ~ 45536992 (+)
G1742423 LOC106608754 non-coding upstream 4527 45535628 ~ 45535902 (+)
G1743002 NA non-coding downstream 38669 45579308 ~ 45606291 (+)
G1743003 NA non-coding downstream 39776 45580415 ~ 45606695 (+)
G1743004 NA non-coding downstream 40260 45580899 ~ 45626721 (+)
G1743007 NA non-coding downstream 40945 45581584 ~ 45627145 (+)
G1743008 NA non-coding downstream 41241 45581880 ~ 45592730 (+)
LOC110500529 LOC106608720 other upstream 1067865 44461338 ~ 44480565 (+)
LOC110500528 tmem256 other upstream 1088897 44446186 ~ 44451532 (+)
G1740752 NA other upstream 1327199 44212786 ~ 44213230 (+)
G1743043 NA other downstream 98657 45639296 ~ 45639742 (+)
G1743077 NA other downstream 166503 45707142 ~ 45709950 (+)
G1744645 NA other downstream 1623265 47163904 ~ 47236823 (+)
G1746210 NA other downstream 2554128 48094767 ~ 48095119 (+)

Expression


Co-expression Network