Gene
RNA
| Item | Value |
|---|---|
| gene id | G1743004 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 45580899 ~ 45626721 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1996039 | False | 233 | lncRNA | 0.51 | 2 | 45580899 | 45591317 |
| TU1996038 | True | 398 | lncRNA | 0.50 | 2 | 45591085 | 45626721 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-38p12.3 | LOC106608755 | coding | upstream | 15157 | 45544516 ~ 45565742 (+) |
| LOC110500870 | LOC106608752 | coding | upstream | 63666 | 45485247 ~ 45517233 (+) |
| nectin4a | LOC106608750 | coding | upstream | 105985 | 45455659 ~ 45474914 (+) |
| fcer1g | LOC106608748 | coding | upstream | 131187 | 45444361 ~ 45449712 (+) |
| ndufs2 | ndufs2 | coding | upstream | 136702 | 45432580 ~ 45444197 (+) |
| si:dkey-19b23.7 | LOC106608757 | coding | downstream | 16140 | 45642861 ~ 45648249 (+) |
| LOC110500572 | LOC106608759 | coding | downstream | 50940 | 45677661 ~ 45686049 (+) |
| LOC110500573 | LOC106608761 | coding | downstream | 61729 | 45688450 ~ 45702662 (+) |
| LOC110500577 | lsmd1 | coding | downstream | 117889 | 45744610 ~ 45755368 (+) |
| cnpy4 | cnpy4 | coding | downstream | 221465 | 45848186 ~ 45850007 (+) |
| G1742428 | NA | non-coding | upstream | 40260 | 45540429 ~ 45540639 (+) |
| G1742427 | LOC106608754 | non-coding | upstream | 41326 | 45539166 ~ 45539573 (+) |
| G1742426 | NA | non-coding | upstream | 42179 | 45538406 ~ 45538720 (+) |
| G1742425 | NA | non-coding | upstream | 43475 | 45537063 ~ 45537424 (+) |
| G1742424 | NA | non-coding | upstream | 43907 | 45536754 ~ 45536992 (+) |
| G1743037 | NA | non-coding | downstream | 3974 | 45630695 ~ 45630971 (+) |
| G1743039 | NA | non-coding | downstream | 6417 | 45633138 ~ 45633376 (+) |
| G1743060 | NA | non-coding | downstream | 38273 | 45664994 ~ 45665215 (+) |
| G1743068 | NA | non-coding | downstream | 47920 | 45674641 ~ 45674846 (+) |
| G1743069 | NA | non-coding | downstream | 48385 | 45675106 ~ 45675347 (+) |
| LOC110500529 | LOC106608720 | other | upstream | 1108335 | 44461338 ~ 44480565 (+) |
| LOC110500528 | tmem256 | other | upstream | 1129367 | 44446186 ~ 44451532 (+) |
| G1743043 | NA | other | downstream | 12575 | 45639296 ~ 45639742 (+) |
| G1743077 | NA | other | downstream | 80421 | 45707142 ~ 45709950 (+) |
| G1744645 | NA | other | downstream | 1537183 | 47163904 ~ 47236823 (+) |
| G1746210 | NA | other | downstream | 2468046 | 48094767 ~ 48095119 (+) |
| G1746471 | LOC106608612 | other | downstream | 2698379 | 48325100 ~ 48363926 (+) |
