G1743007


Basic Information

Item Value
gene id G1743007
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 45581584 ~ 45627145 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1996044
CAGCTTGTGAACAGCAGCATCCTCAAATGGCAGCCTGAGAATGTAGGCATGAAGGGTACTATTGGGCTGGGGGACCATGGTTATGACAAGGCCACTTTTAGTCGCCTCTAGTATGGTGAAGTTGTGACCATTGAGCTTCACAGCCACCAGGTCAACATCGTAGGAGAGGTTCCCCAGGTAAACAGTAAACACACGATCCTCAAGGACTGTTT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1996044 True 212 lncRNA 0.50 2 45581584 45627145

Neighbor

gene id symbol gene type direction distance location
si:dkey-38p12.3 LOC106608755 coding upstream 15842 45544516 ~ 45565742 (+)
LOC110500870 LOC106608752 coding upstream 64351 45485247 ~ 45517233 (+)
nectin4a LOC106608750 coding upstream 106670 45455659 ~ 45474914 (+)
fcer1g LOC106608748 coding upstream 131872 45444361 ~ 45449712 (+)
ndufs2 ndufs2 coding upstream 137387 45432580 ~ 45444197 (+)
si:dkey-19b23.7 LOC106608757 coding downstream 15716 45642861 ~ 45648249 (+)
LOC110500572 LOC106608759 coding downstream 50516 45677661 ~ 45686049 (+)
LOC110500573 LOC106608761 coding downstream 61305 45688450 ~ 45702662 (+)
LOC110500577 lsmd1 coding downstream 117465 45744610 ~ 45755368 (+)
cnpy4 cnpy4 coding downstream 221041 45848186 ~ 45850007 (+)
G1742428 NA non-coding upstream 40945 45540429 ~ 45540639 (+)
G1742427 LOC106608754 non-coding upstream 42011 45539166 ~ 45539573 (+)
G1742426 NA non-coding upstream 42864 45538406 ~ 45538720 (+)
G1742425 NA non-coding upstream 44160 45537063 ~ 45537424 (+)
G1742424 NA non-coding upstream 44592 45536754 ~ 45536992 (+)
G1743037 NA non-coding downstream 3550 45630695 ~ 45630971 (+)
G1743039 NA non-coding downstream 5993 45633138 ~ 45633376 (+)
G1743060 NA non-coding downstream 37849 45664994 ~ 45665215 (+)
G1743068 NA non-coding downstream 47496 45674641 ~ 45674846 (+)
G1743069 NA non-coding downstream 47961 45675106 ~ 45675347 (+)
LOC110500529 LOC106608720 other upstream 1109020 44461338 ~ 44480565 (+)
LOC110500528 tmem256 other upstream 1130052 44446186 ~ 44451532 (+)
G1743043 NA other downstream 12151 45639296 ~ 45639742 (+)
G1743077 NA other downstream 79997 45707142 ~ 45709950 (+)
G1744645 NA other downstream 1536759 47163904 ~ 47236823 (+)
G1746210 NA other downstream 2467622 48094767 ~ 48095119 (+)
G1746471 LOC106608612 other downstream 2697955 48325100 ~ 48363926 (+)

Expression


Co-expression Network