G1743008


Basic Information

Item Value
gene id G1743008
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 45581880 ~ 45592730 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1996046
TTACGGTTAATGATGGAGAGGTGCTGGATCAGAAGAGGTGTGTTCATGGGCCTGTGGAGGCGGAGTCTGGTCTCCACACCACAGTCATCAAGAAAGATTTGTTCATAGTAGAGATGGACCACATAGAACTCACGGTACATGTtgcccatcacaaagctctgGAAGAGTTGAAACCGTTATGAAGCATCTGCCATTAGGTTATATGGTACAAAGTAGAATATT

Function

NR:

description
uncharacterized protein LOC110500872

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1996046 True 222 lncRNA 0.45 2 45581880 45592730

Neighbor

gene id symbol gene type direction distance location
si:dkey-38p12.3 LOC106608755 coding upstream 16138 45544516 ~ 45565742 (+)
LOC110500870 LOC106608752 coding upstream 64647 45485247 ~ 45517233 (+)
nectin4a LOC106608750 coding upstream 106966 45455659 ~ 45474914 (+)
fcer1g LOC106608748 coding upstream 132168 45444361 ~ 45449712 (+)
ndufs2 ndufs2 coding upstream 137683 45432580 ~ 45444197 (+)
si:dkey-19b23.7 LOC106608757 coding downstream 50131 45642861 ~ 45648249 (+)
LOC110500572 LOC106608759 coding downstream 84931 45677661 ~ 45686049 (+)
LOC110500573 LOC106608761 coding downstream 95720 45688450 ~ 45702662 (+)
LOC110500577 lsmd1 coding downstream 151880 45744610 ~ 45755368 (+)
cnpy4 cnpy4 coding downstream 255456 45848186 ~ 45850007 (+)
G1742428 NA non-coding upstream 41241 45540429 ~ 45540639 (+)
G1742427 LOC106608754 non-coding upstream 42307 45539166 ~ 45539573 (+)
G1742426 NA non-coding upstream 43160 45538406 ~ 45538720 (+)
G1742425 NA non-coding upstream 44456 45537063 ~ 45537424 (+)
G1742424 NA non-coding upstream 44888 45536754 ~ 45536992 (+)
G1743037 NA non-coding downstream 37965 45630695 ~ 45630971 (+)
G1743039 NA non-coding downstream 40408 45633138 ~ 45633376 (+)
G1743060 NA non-coding downstream 72264 45664994 ~ 45665215 (+)
G1743068 NA non-coding downstream 81911 45674641 ~ 45674846 (+)
G1743069 NA non-coding downstream 82376 45675106 ~ 45675347 (+)
LOC110500529 LOC106608720 other upstream 1109316 44461338 ~ 44480565 (+)
LOC110500528 tmem256 other upstream 1130348 44446186 ~ 44451532 (+)
G1743043 NA other downstream 46566 45639296 ~ 45639742 (+)
G1743077 NA other downstream 114412 45707142 ~ 45709950 (+)
G1744645 NA other downstream 1571174 47163904 ~ 47236823 (+)
G1746210 NA other downstream 2502037 48094767 ~ 48095119 (+)
G1746471 LOC106608612 other downstream 2732370 48325100 ~ 48363926 (+)

Expression


Co-expression Network