G1743077


Basic Information

Item Value
gene id G1743077
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 45707142 ~ 45709950 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1996124
CATAAATTGTCATAACACCCCCGTATATCAAAGTACTGATAGTGTACTGTACGAGAGTGGTGGGTGTGATGATATGATAACTACTGCTGGTGTGGCTGCAGCTGCTGTACAtatagccagagagagacagagggggaacaGGGAAACCTTATGGCACGTGGCCCAGTGGAGGCCACTGGAAGGGAAGGAAGGCAGAGGGACTACTTAACTTAgtgctgtgtgactgtgtgtgagagtTCAAATCTGATTACCAGCAATACAAATAAAGCTGGATAGTtggagtgaaggggagaggggttgagaaagagagggagagaaagggagatgagaCATGTAAAAAGTGAGAgacaaaagaaagagagagggatatgaaaaaagacagaaaaagacagactgggaaagagagggagagaacaaaaacgagagagaaagagaatgcgAGTGGGGGGGGGGATGTTATGGATCACTTGTGCTGTTACAAGATAAAGGCTTTTCCAGCTCAGATACCTCAGATCATATACTTCACTCTCACTCAAAACCAATCCAAGCatattgctctccctctctcctctctctctctctctttctctctctctgtctgactccaAAGTCACCCCGTGCACTCATCCACCACTTTCAACTCTTCACTCCGACTCATCTCCCCctctttttccctccctctctctcccttctcaggAGTGTAGTCTAATCCCTCGTTCATTCTGCTCTACCTGTTTCCTTTGTTCGAGCAGCTCTTTCTTGCctatcagagagaaagagagagagagagagagagagagagagagagagagagaaagagagaaagagagagagataaggtgagagagagagagaaagagagagagagagagagagagagaaagagcgaaagagagagagataaggtgagagagagagaaagagagagagagagagagagagagagagagagagagagagagagagagagagagagaaggtgagagagcaCTGACAGTCAAGACTTTGTGGGCCTGATCCTCTAAACATCCAATGCCGTGGTGCAGTCTATCATTCACCTCGGAGAGAAATGAAaaccagaaagagagggaggaggaggaggagaagagctgGCAGTGAAAATGAGAGCAGGCAGCAGATGTTTTGTAGACATAGTTGTCCATTTTGGACAAGAGGAGTCCTGGAGAGACAGACTTGCAGCTTGACTTAGCATAACAAGAATGTCCACAATTACTCTATCAgagttgtttttgtgtgtgtatgagtgtgtattcCCACGTGTGTATGCCAACACTTTCGCACATgcatgagcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgcgcacaggcCTGTCCTGTACAATATCACTTTCCCTTTTGCAGATCCAATCGAATCTTTTTGTAATGTCATTCCATTAAAGAATTTGGGCCGACAAGTCAAGCCACGATTTGTGCTTTGAGGTACAGGAAACGCCAGCTGAGCACTTTTTCACACATACACTTCATGACACTACACCACATCCTTGTCCCAATACCCCTATTGCCTGCGTTTCCTTCTTACGTCCATCAAGATAAAGTGACCCCATATAAAGGTGCTACAGTAAGTATGATTGGCCAATACAGTACAAAGAATACAGGTCCCTACGCCCAGCTCTCTTCCCATTGGTCACTGTCCTCTTCACATCTCATGTTGATTGGTTCATTACGACGACAACAATATAAAAACAGGAAGTACTTTTGTTTCTACACCTGTGCTGCTTTACGGTTGGTTGGGCTTGGAATCTGGAATGCCAAGGGGTGATTCAATCCAGGGACAATTTTTCCTCATTCTAATTTTTTGGGGTTGAAATTAGAAAATCCAGCATGGTCCACTTTGGCTTGCATTTGCATTGCAGTGCCTTGTAATGAACAGAGGAGGGTAgtacagagagagaccagtcttAGTAGGTTTCGGTAATGTTGTGTGCaaggtctgctgtgtgtgtgtgtaagagagagggaggatgaggagcGCCGGACTGAGAGAGGGATTGTGGAGGAATGAAGGAGTGCAGAGCCGAAGTGCGGAGTCGTTCACTCAGCCGTCGGATAAAGAATGATTCCGGAGGGGAAACGTTGGGGCAGGAGGGGAAATGTTGGGGCAGAacgggagagagaaggaatagaAACGGGCCAGTAGATTTGTCTGACGCAGAGAAGGAGGAATGAAAAAGAACAAATCTCCCCTTTCTTTGCATGTTTCTCTCTTTCAGCTGCTCATACCTACATTCTTGAAACCCTTCTCTCTTGATTACATTAACATACTCTTGCTATTTTTTCCTCGTTGCCTTTTTCTCTCTGCCAACACTTCTCCCCCAGAGTCAGCTTACGGgcctctttccttctttccttccctctttccccctctattTTTTTGGCCAGACAATTCACCTTCCTCTCACTATAAATTGTCCATGTTTTACTTCAAAGCAGTGCCTTttggattctctctctctttctccctgcctccctccacctccctctctctctcactatccatCGTCCATGCTTTACTGCAAAGTGCCGTCTCTTCTTTtggattctgtctctctctgtgcttctccacctctccctccatctctccatccctccatcttcaGGGTTTCTTGGGCCGTCCGTTGCGGGGCAGGTTCTCCACGGTGTTACTGAGGCGGTACTTGACGATGATGCTGTGCACCGTGGACTTAGGCATCCTCAGCTCCTGCCCGATGGACCCCTCCGATTTGCCGTCCTTCCACAGGTCGAC

Function

NR:

description
hypothetical protein cypCar_00019158, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1996124 True 2809 TUCP 0.47 1 45707142 45709950

Neighbor

gene id symbol gene type direction distance location
LOC110500573 LOC106608761 coding upstream 4480 45688450 ~ 45702662 (+)
LOC110500572 LOC106608759 coding upstream 21093 45677661 ~ 45686049 (+)
si:dkey-19b23.7 LOC106608757 coding upstream 58893 45642861 ~ 45648249 (+)
si:dkey-38p12.3 LOC106608755 coding upstream 141400 45544516 ~ 45565742 (+)
LOC110500870 LOC106608752 coding upstream 189909 45485247 ~ 45517233 (+)
LOC110500577 lsmd1 coding downstream 34660 45744610 ~ 45755368 (+)
cnpy4 cnpy4 coding downstream 138236 45848186 ~ 45850007 (+)
LOC110500584 LOC106608769 coding downstream 159937 45869887 ~ 45888657 (+)
LOC110500588 LOC106608772 coding downstream 232207 45942157 ~ 45944870 (+)
LOC110500591 LOC106608776 coding downstream 306472 46016422 ~ 46020567 (+)
G1743076 NA non-coding upstream 682 45703176 ~ 45706460 (+)
G1743070 NA non-coding upstream 31300 45675440 ~ 45675842 (+)
G1743069 NA non-coding upstream 31795 45675106 ~ 45675347 (+)
G1743068 NA non-coding upstream 32296 45674641 ~ 45674846 (+)
G1743060 NA non-coding upstream 41927 45664994 ~ 45665215 (+)
G1743087 NA non-coding downstream 2753 45712703 ~ 45712910 (+)
G1743089 NA non-coding downstream 5961 45715911 ~ 45716144 (+)
G1743090 NA non-coding downstream 8023 45717973 ~ 45718186 (+)
G1743091 LOC106608762 non-coding downstream 8437 45718387 ~ 45718742 (+)
G1743092 NA non-coding downstream 9796 45719746 ~ 45720436 (+)
G1743043 NA other upstream 67400 45639296 ~ 45639742 (+)
fcer1g LOC106608748 other upstream 258455 45444361 ~ 45449712 (+)
LOC110500529 LOC106608720 other upstream 1234578 44461338 ~ 44480565 (+)
G1744645 NA other downstream 1453954 47163904 ~ 47236823 (+)
G1746210 NA other downstream 2384817 48094767 ~ 48095119 (+)
G1746471 LOC106608612 other downstream 2615150 48325100 ~ 48363926 (+)
G1747255 NA other downstream 3267376 48977326 ~ 48977758 (+)
G1747814 LOC106606817 other downstream 3735889 49445839 ~ 49446626 (+)

Expression


Co-expression Network