Gene
RNA
| Item | Value |
|---|---|
| gene id | G1743098 |
| gene name | LOC106608762 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 45727476 ~ 45727961 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1996146 | True | 486 | lncRNA | 0.51 | 1 | 45727476 | 45727961 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500573 | LOC106608761 | coding | upstream | 24814 | 45688450 ~ 45702662 (+) |
| LOC110500572 | LOC106608759 | coding | upstream | 41427 | 45677661 ~ 45686049 (+) |
| si:dkey-19b23.7 | LOC106608757 | coding | upstream | 79227 | 45642861 ~ 45648249 (+) |
| si:dkey-38p12.3 | LOC106608755 | coding | upstream | 161734 | 45544516 ~ 45565742 (+) |
| LOC110500870 | LOC106608752 | coding | upstream | 210243 | 45485247 ~ 45517233 (+) |
| LOC110500577 | lsmd1 | coding | downstream | 16649 | 45744610 ~ 45755368 (+) |
| cnpy4 | cnpy4 | coding | downstream | 120225 | 45848186 ~ 45850007 (+) |
| LOC110500584 | LOC106608769 | coding | downstream | 141926 | 45869887 ~ 45888657 (+) |
| LOC110500588 | LOC106608772 | coding | downstream | 214196 | 45942157 ~ 45944870 (+) |
| LOC110500591 | LOC106608776 | coding | downstream | 288461 | 46016422 ~ 46020567 (+) |
| G1743096 | NA | non-coding | upstream | 2439 | 45724672 ~ 45725037 (+) |
| G1743094 | LOC107738011 | non-coding | upstream | 4105 | 45723067 ~ 45723371 (+) |
| G1743095 | NA | non-coding | upstream | 5270 | 45721996 ~ 45722206 (+) |
| G1743093 | NA | non-coding | upstream | 6633 | 45720512 ~ 45720843 (+) |
| G1743092 | NA | non-coding | upstream | 7040 | 45719746 ~ 45720436 (+) |
| G1743099 | chd3 | non-coding | downstream | 539 | 45728500 ~ 45728760 (+) |
| G1743100 | NA | non-coding | downstream | 929 | 45728890 ~ 45729205 (+) |
| G1743112 | NA | non-coding | downstream | 57889 | 45785850 ~ 45793826 (+) |
| G1743166 | NA | non-coding | downstream | 163936 | 45891897 ~ 45928329 (+) |
| G1743171 | NA | non-coding | downstream | 194545 | 45922506 ~ 45967783 (+) |
| G1743077 | NA | other | upstream | 17526 | 45707142 ~ 45709950 (+) |
| G1743043 | NA | other | upstream | 87734 | 45639296 ~ 45639742 (+) |
| fcer1g | LOC106608748 | other | upstream | 278789 | 45444361 ~ 45449712 (+) |
| G1744645 | NA | other | downstream | 1435943 | 47163904 ~ 47236823 (+) |
| G1746210 | NA | other | downstream | 2366806 | 48094767 ~ 48095119 (+) |
| G1746471 | LOC106608612 | other | downstream | 2597139 | 48325100 ~ 48363926 (+) |
| G1747255 | NA | other | downstream | 3249365 | 48977326 ~ 48977758 (+) |
| G1747814 | LOC106606817 | other | downstream | 3717878 | 49445839 ~ 49446626 (+) |
