G1743648


Basic Information

Item Value
gene id G1743648
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 46183300 ~ 46183714 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1996784
cccacgtgggtgattgaaaaaCGAAATGTTTTGCCAGTTGTCGTGGtaaaagtgtagatgccaatcaccatataatttcaaagatgaaaaagcctggaaggaggagagatgactagaaatgatttggttggccgttttatttgtggattaattgtcggagtagaagaccttgtgcatttcaggtaaaataacaactcaatgtttatatcccaggacaaattagctagcaacagcaagctagctaaataggacaaattagctagcaagtgcaagctaactagctaaattgccatacttgtttaatgcttttcgacctgtccccaaattaatgtcatttgttcagagtttgttttgatattttaacctgcgtatcgtgatcgcgtttggtgtagggggacaaaataaatgtatgcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1996784 True 415 lncRNA 0.38 1 46183300 46183714

Neighbor

gene id symbol gene type direction distance location
LOC110500595 LOC106608779 coding upstream 10907 46151441 ~ 46172393 (+)
LOC110500591 LOC106608776 coding upstream 162733 46016422 ~ 46020567 (+)
LOC110500588 LOC106608772 coding upstream 238430 45942157 ~ 45944870 (+)
LOC110500584 LOC106608769 coding upstream 294643 45869887 ~ 45888657 (+)
cnpy4 cnpy4 coding upstream 333293 45848186 ~ 45850007 (+)
LOC110500598 LOC106608783 coding downstream 18117 46201831 ~ 46210557 (+)
LOC110500597 LOC106608784 coding downstream 32903 46216617 ~ 46266922 (+)
LOC118936379 LOC106608786 coding downstream 34835 46218549 ~ 46222191 (+)
LOC110500876 LOC106577625 coding downstream 850388 47034102 ~ 47113062 (+)
LOC110500605 LOC106608606 coding downstream 1184950 47368664 ~ 47958017 (+)
G1743171 NA non-coding upstream 215517 45922506 ~ 45967783 (+)
G1743202 NA non-coding upstream 253178 45928826 ~ 45930122 (+)
G1743166 NA non-coding upstream 254971 45891897 ~ 45928329 (+)
G1743654 NA non-coding downstream 7501 46191215 ~ 46192309 (+)
G1743660 NA non-coding downstream 14785 46198499 ~ 46198707 (+)
G1743799 NA non-coding downstream 120702 46304416 ~ 46304977 (+)
G1743935 NA non-coding downstream 298372 46482086 ~ 46563803 (+)
G1743077 NA other upstream 473350 45707142 ~ 45709950 (+)
G1743043 NA other upstream 543558 45639296 ~ 45639742 (+)
si:dkey-38p12.3 LOC106608755 other upstream 627711 45544516 ~ 45565742 (+)
LOC110500870 LOC106608752 other upstream 689348 45485247 ~ 45517233 (+)
fcer1g LOC106608748 other upstream 734613 45444361 ~ 45449712 (+)
G1744645 NA other downstream 980190 47163904 ~ 47236823 (+)
G1746210 NA other downstream 1911053 48094767 ~ 48095119 (+)
G1746471 LOC106608612 other downstream 2141386 48325100 ~ 48363926 (+)
G1747255 NA other downstream 2793612 48977326 ~ 48977758 (+)
G1747814 LOC106606817 other downstream 3262125 49445839 ~ 49446626 (+)

Expression


Co-expression Network