G1743799


Basic Information

Item Value
gene id G1743799
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 46304416 ~ 46304977 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1996946
ttacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagacagaatttttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgactaggtcatcataacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctcagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccacccccatgtttgacagtggggatggtgtgttcagggtgatgagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgt

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1996946 True 562 lncRNA 0.43 1 46304416 46304977

Neighbor

gene id symbol gene type direction distance location
LOC110500597 LOC106608784 coding upstream 37494 46216617 ~ 46266922 (+)
LOC118936379 LOC106608786 coding upstream 82225 46218549 ~ 46222191 (+)
LOC110500598 LOC106608783 coding upstream 93859 46201831 ~ 46210557 (+)
LOC110500595 LOC106608779 coding upstream 132023 46151441 ~ 46172393 (+)
LOC110500591 LOC106608776 coding upstream 283849 46016422 ~ 46020567 (+)
LOC110500876 LOC106577625 coding downstream 729125 47034102 ~ 47113062 (+)
LOC110500605 LOC106608606 coding downstream 1063687 47368664 ~ 47958017 (+)
LOC110500610 LOC106608613 coding downstream 2077877 48382854 ~ 48414134 (+)
LOC110500624 LOC106608622 coding downstream 3288409 49593386 ~ 49605877 (+)
LOC110500625 cj011 coding downstream 3301122 49606099 ~ 49609714 (+)
G1743660 NA non-coding upstream 105709 46198499 ~ 46198707 (+)
G1743654 NA non-coding upstream 112107 46191215 ~ 46192309 (+)
G1743648 NA non-coding upstream 120702 46183300 ~ 46183714 (+)
G1743935 NA non-coding downstream 177109 46482086 ~ 46563803 (+)
G1744182 NA non-coding downstream 269352 46574329 ~ 46574637 (+)
G1744226 NA non-coding downstream 315832 46620809 ~ 46621725 (+)
G1744346 NA non-coding downstream 389716 46694693 ~ 46694907 (+)
G1744417 NA non-coding downstream 464583 46769560 ~ 46770064 (+)
G1743077 NA other upstream 594466 45707142 ~ 45709950 (+)
G1743043 NA other upstream 664674 45639296 ~ 45639742 (+)
si:dkey-38p12.3 LOC106608755 other upstream 748827 45544516 ~ 45565742 (+)
LOC110500870 LOC106608752 other upstream 810464 45485247 ~ 45517233 (+)
fcer1g LOC106608748 other upstream 855729 45444361 ~ 45449712 (+)
G1744645 NA other downstream 858927 47163904 ~ 47236823 (+)
G1746210 NA other downstream 1789790 48094767 ~ 48095119 (+)
G1746471 LOC106608612 other downstream 2020123 48325100 ~ 48363926 (+)
G1747255 NA other downstream 2672349 48977326 ~ 48977758 (+)
G1747814 LOC106606817 other downstream 3140862 49445839 ~ 49446626 (+)

Expression


Co-expression Network