Gene
RNA
| Item | Value |
|---|---|
| gene id | G1745093 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 47825079 ~ 47826140 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1998314 | True | 1024 | lncRNA | 0.44 | 2 | 47825079 | 47826140 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500876 | LOC106577625 | coding | upstream | 712017 | 47034102 ~ 47113062 (+) |
| LOC110500597 | LOC106608784 | coding | upstream | 1558157 | 46216617 ~ 46266922 (+) |
| LOC118936379 | LOC106608786 | coding | upstream | 1602888 | 46218549 ~ 46222191 (+) |
| LOC110500598 | LOC106608783 | coding | upstream | 1614522 | 46201831 ~ 46210557 (+) |
| LOC110500595 | LOC106608779 | coding | upstream | 1652686 | 46151441 ~ 46172393 (+) |
| LOC110500610 | LOC106608613 | coding | downstream | 556714 | 48382854 ~ 48414134 (+) |
| LOC110500624 | LOC106608622 | coding | downstream | 1767246 | 49593386 ~ 49605877 (+) |
| LOC110500625 | cj011 | coding | downstream | 1779959 | 49606099 ~ 49609714 (+) |
| aco1 | aco1 | coding | downstream | 1785111 | 49611251 ~ 49623432 (+) |
| LOC110500627 | LOC106608625 | coding | downstream | 1828552 | 49654692 ~ 49662658 (+) |
| G1744969 | NA | non-coding | upstream | 192256 | 47631604 ~ 47632823 (+) |
| G1744968 | NA | non-coding | upstream | 193194 | 47630628 ~ 47631885 (+) |
| G1744645 | NA | non-coding | upstream | 588256 | 47163904 ~ 47236823 (+) |
| G1744460 | NA | non-coding | upstream | 964090 | 46834804 ~ 46860989 (+) |
| G1744793 | NA | non-coding | downstream | 134443 | 47960583 ~ 47961550 (+) |
| G1745174 | NA | non-coding | downstream | 138819 | 47964959 ~ 47965199 (+) |
| G1745175 | NA | non-coding | downstream | 139181 | 47965321 ~ 47965630 (+) |
| G1746056 | NA | non-coding | downstream | 156266 | 47982406 ~ 47982633 (+) |
| G1746063 | NA | non-coding | downstream | 162474 | 47988614 ~ 47988923 (+) |
| G1743077 | NA | other | upstream | 2115129 | 45707142 ~ 45709950 (+) |
| G1743043 | NA | other | upstream | 2185337 | 45639296 ~ 45639742 (+) |
| si:dkey-38p12.3 | LOC106608755 | other | upstream | 2269490 | 45544516 ~ 45565742 (+) |
| LOC110500870 | LOC106608752 | other | upstream | 2331127 | 45485247 ~ 45517233 (+) |
| G1746210 | NA | other | downstream | 268627 | 48094767 ~ 48095119 (+) |
| G1746471 | LOC106608612 | other | downstream | 498960 | 48325100 ~ 48363926 (+) |
| G1747255 | NA | other | downstream | 1151186 | 48977326 ~ 48977758 (+) |
| G1747814 | LOC106606817 | other | downstream | 1619699 | 49445839 ~ 49446626 (+) |
