Gene
RNA
| Item | Value |
|---|---|
| gene id | G1744793 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 47960583 ~ 47961550 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1997994 | True | 968 | lncRNA | 0.33 | 1 | 47960583 | 47961550 |
47,958,800
47,959,200
47,959,600
47,960,000
47,960,400
47,960,800
47,961,200
47,961,600
47,962,000
47,962,400
47,962,800
47,963,200
47,963,600
47,964,000
47,964,400
47,964,800
NC_048585.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500605 | LOC106608606 | coding | upstream | 2566 | 47368664 ~ 47958017 (+) |
| LOC110500876 | LOC106577625 | coding | upstream | 847521 | 47034102 ~ 47113062 (+) |
| LOC110500597 | LOC106608784 | coding | upstream | 1693661 | 46216617 ~ 46266922 (+) |
| LOC118936379 | LOC106608786 | coding | upstream | 1738392 | 46218549 ~ 46222191 (+) |
| LOC110500598 | LOC106608783 | coding | upstream | 1750026 | 46201831 ~ 46210557 (+) |
| LOC110500610 | LOC106608613 | coding | downstream | 421304 | 48382854 ~ 48414134 (+) |
| LOC110500624 | LOC106608622 | coding | downstream | 1631836 | 49593386 ~ 49605877 (+) |
| LOC110500625 | cj011 | coding | downstream | 1644549 | 49606099 ~ 49609714 (+) |
| aco1 | aco1 | coding | downstream | 1649701 | 49611251 ~ 49623432 (+) |
| LOC110500627 | LOC106608625 | coding | downstream | 1693142 | 49654692 ~ 49662658 (+) |
| G1745093 | NA | non-coding | upstream | 134443 | 47825079 ~ 47826140 (+) |
| G1744969 | NA | non-coding | upstream | 327760 | 47631604 ~ 47632823 (+) |
| G1744968 | NA | non-coding | upstream | 328698 | 47630628 ~ 47631885 (+) |
| G1744645 | NA | non-coding | upstream | 723760 | 47163904 ~ 47236823 (+) |
| G1745174 | NA | non-coding | downstream | 3409 | 47964959 ~ 47965199 (+) |
| G1745175 | NA | non-coding | downstream | 3771 | 47965321 ~ 47965630 (+) |
| G1746056 | NA | non-coding | downstream | 20856 | 47982406 ~ 47982633 (+) |
| G1746063 | NA | non-coding | downstream | 27064 | 47988614 ~ 47988923 (+) |
| G1746067 | NA | non-coding | downstream | 29802 | 47991352 ~ 47991723 (+) |
| G1743077 | NA | other | upstream | 2250633 | 45707142 ~ 45709950 (+) |
| G1743043 | NA | other | upstream | 2320841 | 45639296 ~ 45639742 (+) |
| si:dkey-38p12.3 | LOC106608755 | other | upstream | 2404994 | 45544516 ~ 45565742 (+) |
| LOC110500870 | LOC106608752 | other | upstream | 2466631 | 45485247 ~ 45517233 (+) |
| G1746210 | NA | other | downstream | 133217 | 48094767 ~ 48095119 (+) |
| G1746471 | LOC106608612 | other | downstream | 363550 | 48325100 ~ 48363926 (+) |
| G1747255 | NA | other | downstream | 1015776 | 48977326 ~ 48977758 (+) |
| G1747814 | LOC106606817 | other | downstream | 1484289 | 49445839 ~ 49446626 (+) |
